Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2 150 2e-31 seq5 123 3e-23 seq6 111 2e-19 >seq2 Length=1335671 Score = 150 bits (166), Expect = 2e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27401 CTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460 ||| ||||||||| || || || || |||||||| ||||| ||||| ||||| || || | Sbjct 4834 CTAAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAAT 4893 Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520 | || | ||||| ||| | ||| || || || |||||||| || ||||| || | Sbjct 4894 CTTCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTG 4953 Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 |||| || | |||| ||||||||||||||| | || || | | | ||| || | |||| Sbjct 4954 ACCAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACT 5013 Query 27581 ATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | || |||||||||||||||| ||||| |||||||| Sbjct 5014 ACAACATCCAAAAGGAATCCACCCTTCACTTAGTCTTG 5051 >seq5 Length=831479 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| | || || ||||| || ||| | || ||||| || | Sbjct 265445 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCT 265504 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || | ||| || || || || ||||| || || || || ||||| Sbjct 265505 GATACCATTGACAACGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCAA 265564 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || |||||||||||| | || || | | | ||| || | ||||| || Sbjct 265565 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACCTTATCCGACTACAAC 265624 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||||||||||||||||||||| Sbjct 265625 ATCCAAAAGGAATCCACTCTTCA 265647 >seq6 Length=817167 Score = 111 bits (122), Expect = 2e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| ||||| || || ||||| || || ||||| ||||| Sbjct 642374 ATGCAGATCTTTGTCAAGACACTTACGGGTAAAACTATCACCCTAGAGGTGGAGTCGTCA 642433 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| |||| || |||||||||||||| || ||||| || ||||| Sbjct 642434 GACACCATTGACAATGTGAAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAA 642493 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCA 27551 ||| | | || ||||||||||| || Sbjct 642494 CAGAGATTGATCTTTGCTGGTAAACA 642519 Score = 86.0 bits (94), Expect = 7e-12 Identities = 95/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || |||||||||||||| || ||||| || ||||| ||| | | || ||||| |||||| Sbjct 642985 AAGATTCAGGACAAGGAAGGTATTCCACCTGACCAACAGAGATTGATCTTTGCGGGTAAG 643044 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||| | ||||| | | || || | || || || | ||||| |||||||| || ||| Sbjct 643045 CAATTAGAGGACGGAAGAACGCTMTCRGAYTACAACATTCAAAAAGAATCCACACTCCAT 643104 Query 27610 CTAGTCTTG 27618 | || ||| Sbjct 643105 TTGGTGTTG 643113 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| ||||| |||||||| || || |||||||| || || Sbjct 641644 ATGCAGATTTTCGTTAAGACACTTACAGGCAAGACCATCACCCTTGAGGTGGAATCTTCG 641703 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || |||| || || ||||||||||| || ||||| || ||||| Sbjct 641704 GACACCATTGACAACGTGAAACAGAAGATCCAGGACAAGGAAGGTATTCCACCTGACCAA 641763 Query 27526 CAGCGTCTAATTTTTGCTGG 27545 ||| | | || ||||| || Sbjct 641764 CAGAGATTGATCTTTGCGGG 641783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310136231440