Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq5 158 3e-33
seq2 154 3e-32
seq6 134 3e-26
>seq5
Length=831479
Score = 158 bits (174), Expect = 3e-33
Identities = 159/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
|||||||||||| || ||||||||||| || || | | ||| || || ||||| | ||
Sbjct 265648 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACCGTCTTCTAATTG 265589
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| | | |||||||||||| || | |||||||| || ||||||||
Sbjct 265588 CTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTATCTTGGATCTT 265529
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
||| || ||||| || ||||| ||||| |||||| || | |||||| ||||| || ||
Sbjct 265528 TTGCTTGACGTTGTCAATGGTATCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGT 265469
Query 211091 GAGAGTCTTTACAAACACCTGCATTTT 211117
| ||||| ||||| | ||||| ||
Sbjct 265468 TAAGGTCTTGACAAAAATTTGCATCTT 265442
>seq2
Length=1335671
Score = 154 bits (170), Expect = 3e-32
Identities = 166/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | |||||| ||||| || ||||||||||| || || | | ||| || ||
Sbjct 5054 TCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACC 4995
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| |||| ||||||||
Sbjct 4994 GTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 4935
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| ||||||||||| || || || || |||||||| || ||| || || || || ||
Sbjct 4934 GTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCAAGGGTAAT 4875
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118
||||| || || || || || || || | |||||||||
Sbjct 4874 GGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCATTTTA 4835
>seq6
Length=817167
Score = 134 bits (148), Expect = 3e-26
Identities = 130/167 (78%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 210948 AGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGA 211007
|| || ||||| ||||||| ||| || || || ||||| | | ||||||||||| |||
Sbjct 642540 AGCGTTCTTCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCAGGTGGA 642481
Query 211008 ACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACC 211067
| |||||||||||||| ||||| |||||||| || || |||||||| || || |||
Sbjct 642480 ATACCTTCCTTGTCCTGAATCTTCTGTTTCACATTGTCAATGGTGTCTGACGACTCCACC 642421
Query 211068 TCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || || ||||| || ||||| ||||| | ||||||
Sbjct 642420 TCTAGGGTGATAGTTTTACCCGTAAGTGTCTTGACAAAGATCTGCAT 642374
Score = 122 bits (134), Expect = 2e-22
Identities = 111/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 210975 CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT 211034
|| || ||||| | | ||||||||||| |||| |||||||||||||||||||| |||
Sbjct 641783 CCCGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGGATCTTCTGT 641724
Query 211035 TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094
|||||||| || |||||||| || ||| ||||| || ||||| ||||| || || ||
Sbjct 641723 TTCACGTTGTCAATGGTGTCCGAAGATTCCACCTCAAGGGTGATGGTCTTGCCTGTAAGT 641664
Query 211095 GTCTTTACAAACACCTGCAT 211114
||||| || || | ||||||
Sbjct 641663 GTCTTAACGAAAATCTGCAT 641644
Score = 111 bits (122), Expect = 4e-19
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || ||||| |||||||| ||||| || || | || || ||||| || || | |||
Sbjct 643103 TGGAGTGTGGATTCTTTTTGAATGTTGTARTCYGAKAGCGTTCTTCCGTCCTCTAATTGC 643044
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || ||||| | | ||||||||||| |||| |||||||||||||| |||||
Sbjct 643043 TTACCCGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGAATCTTC 642984
Query 211032 TGTTTCACGTTTTCGAT 211048
||||||||||| || ||
Sbjct 642983 TGTTTCACGTTGTCAAT 642967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151450489505
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |