Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq2 138 8e-28
seq6 87.8 1e-12
>seq2
Length=1335671
Score = 138 bits (152), Expect = 8e-28
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 23607 TAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTC 23666
||||||||| ||||||||||||||||| || || || || || || || ||||| || ||
Sbjct 4835 TAAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATC 4894
Query 23667 CACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| |||| | | || ||||| || ||||| |||||| | || || ||
Sbjct 4895 TTCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGA 4954
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||||| | ||||| ||||| || || ||| ||||||||| | || ||| || ||
Sbjct 4955 CCAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTA 5014
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||||| ||||| || ||||| | || ||||| || || ||| |||| ||
Sbjct 5015 CAACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGG 5065
>seq6
Length=817167
Score = 87.8 bits (96), Expect = 1e-12
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23689 AAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCC 23748
||||| || ||| ||||| |||||| | || || || |||||| | || || |||||
Sbjct 642979 AAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAACAGAGATTGATCTTTGCG 643038
Query 23749 GGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACA 23808
|| || ||| | || |||| | | || | || |||||||| |||||||| ||||||
Sbjct 643039 GGTAAGCAATTAGAGGACGGAAGAACGCTMTCRGAYTACAACATTCAAAAAGAATCCACA 643098
Query 23809 TTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
| ||||| || || || ||| |||| ||
Sbjct 643099 CTCCATTTGGTGTTGAGATTGAGAGGTGG 643127
Score = 82.4 bits (90), Expect = 5e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||||||||| || || || || || || ||||| || || || || || ||
Sbjct 641644 ATGCAGATTTTCGTTAAGACACTTACAGGCAAGACCATCACCCTTGAGGTGGAATCTTCG 641703
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | ||||| || || ||||| |||||| | || || || |||
Sbjct 641704 GACACCATTGACAACGTGAAACAGAAGATCCAGGACAAGGAAGGTATTCCACCTGACCAA 641763
Query 23731 CAGCGTTTAATATTTGCCGG 23750
||| | || || ||||| ||
Sbjct 641764 CAGAGATTGATCTTTGCGGG 641783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009447578796
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |