Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq5 264 1e-65
>seq5
Length=831479
Score = 264 bits (292), Expect = 1e-65
Identities = 597/888 (67%), Gaps = 17/888 (2%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|||||||| ||||| |||| |||||| ||||| || || || || |||| || || |||
Sbjct 305283 TTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTT 305224
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376
||||| |||||||| ||||| || ||||||| || ||||| |||| |||||
Sbjct 305223 TCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAGAGAAACAAGA 305164
Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436
| || ||| || |||||||| | ||| || | ||| | || ||| || |||| |||
Sbjct 305163 AGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAG 305104
Query 4437 CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATA 4496
| | || || |||| ||| ||| | |||||| || || |||||| ||| ||
Sbjct 305103 TTGGCTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGAT- 305045
Query 4497 TCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554
||| ||||| || || |||| || | || |||||||| ||||
Sbjct 305044 -CTTGAGCACGATCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAA 304986
Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614
|||| || |||||||| ||||||| ||| | |||||| ||||| || || || ||||
Sbjct 304985 AATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCA 304926
Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674
| |||||||| ||||| | ||| || || | ||||| || || || || || || ||||
Sbjct 304925 TCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTT 304866
Query 4675 CTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTG--TCTTTAATCCA 4732
| || |||||||| || ||||||| ||||| | || ||| || |||||
Sbjct 304865 CAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAA--TGCATTTTCATCGCACATCCA 304808
Query 4733 TTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA 4792
| | | ||||||| || |||| |||| || ||||| | | || || || |||||
Sbjct 304807 TCTCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAA 304748
Query 4793 TTTACTTTT--TTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850
| || ||| ||| || | | ||| ||||| || | || | || ||||
Sbjct 304747 G--AATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTATGTTTCC 304690
Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGA 4910
||||| || ||||| || || || || || || || || | ||||| | | |||
Sbjct 304689 GAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGC 304630
Query 4911 ACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAA 4970
|| || | || |||| || || |||||||| || ||||| || || ||||||
Sbjct 304629 ACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAA 304570
Query 4971 AACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGG 5027
|| ||||| || | || || | ||||| | || ||| || ||||||| |
Sbjct 304569 AAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCG 304510
Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTG 5087
| || || |||| || |||| |||||| | ||||| || |||||||| || ||||||
Sbjct 304509 TGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTG 304450
Query 5088 TACATAGACCAAATATCAGGATA-CTGAATCGGAAGTATGACAAATCT 5134
||||| ||| || ||| | || ||| | ||||| | ||||||||
Sbjct 304449 TACATTTGCCAGATTTCATGGTATTTGATTGGGAAG-AGCACAAATCT 304403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049407427321
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |