Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq5 264 1e-65 >seq5 Length=831479 Score = 264 bits (292), Expect = 1e-65 Identities = 597/888 (67%), Gaps = 17/888 (2%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| ||||| |||| |||||| ||||| || || || || |||| || || ||| Sbjct 305283 TTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTT 305224 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376 ||||| |||||||| ||||| || ||||||| || ||||| |||| ||||| Sbjct 305223 TCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAGAGAAACAAGA 305164 Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 | || ||| || |||||||| | ||| || | ||| | || ||| || |||| ||| Sbjct 305163 AGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAG 305104 Query 4437 CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATA 4496 | | || || |||| ||| ||| | |||||| || || |||||| ||| || Sbjct 305103 TTGGCTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGAT- 305045 Query 4497 TCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554 ||| ||||| || || |||| || | || |||||||| |||| Sbjct 305044 -CTTGAGCACGATCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAA 304986 Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614 |||| || |||||||| ||||||| ||| | |||||| ||||| || || || |||| Sbjct 304985 AATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCA 304926 Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674 | |||||||| ||||| | ||| || || | ||||| || || || || || || |||| Sbjct 304925 TCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTT 304866 Query 4675 CTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTG--TCTTTAATCCA 4732 | || |||||||| || ||||||| ||||| | || ||| || ||||| Sbjct 304865 CAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAA--TGCATTTTCATCGCACATCCA 304808 Query 4733 TTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA 4792 | | | ||||||| || |||| |||| || ||||| | | || || || ||||| Sbjct 304807 TCTCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAA 304748 Query 4793 TTTACTTTT--TTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850 | || ||| ||| || | | ||| ||||| || | || | || |||| Sbjct 304747 G--AATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTATGTTTCC 304690 Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGA 4910 ||||| || ||||| || || || || || || || || | ||||| | | ||| Sbjct 304689 GAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGC 304630 Query 4911 ACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAA 4970 || || | || |||| || || |||||||| || ||||| || || |||||| Sbjct 304629 ACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAA 304570 Query 4971 AACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGG 5027 || ||||| || | || || | ||||| | || ||| || ||||||| | Sbjct 304569 AAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCG 304510 Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTG 5087 | || || |||| || |||| |||||| | ||||| || |||||||| || |||||| Sbjct 304509 TGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTG 304450 Query 5088 TACATAGACCAAATATCAGGATA-CTGAATCGGAAGTATGACAAATCT 5134 ||||| ||| || ||| | || ||| | ||||| | |||||||| Sbjct 304449 TACATTTGCCAGATTTCATGGTATTTGATTGGGAAG-AGCACAAATCT 304403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049407427321