Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq2 122 2e-22
seq5 116 9e-21
>seq2
Length=1335671
Score = 122 bits (134), Expect = 2e-22
Identities = 159/220 (72%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948
||| | ||| | ||||| || || || |||||||||||||| || | ||| ||||| ||
Sbjct 5054 TCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACC 4995
Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||||| | || || || ||||| | || || ||||| | | || ||||||||
Sbjct 4994 GTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 4935
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||| || ||||| |||||| | || | | |||| ||| || |||||||| |||||
Sbjct 4934 GTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCAAGGGTAAT 4875
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTA 152108
|| || || || || || || ||||| | |||||||||
Sbjct 4874 GGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCATTTTA 4835
>seq5
Length=831479
Score = 116 bits (128), Expect = 9e-21
Identities = 153/211 (73%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||| || || |||||||||||||| |||| ||| ||||| || |||||||
Sbjct 265651 CAAG-TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACCGTCTTCTA 265593
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || |||||||| | || || ||||| | | ||| |||||||| ||||| |
Sbjct 265592 ATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTATCTTGGA 265533
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||||| ||||| | || | | | || ||| || ||||| | ||| || || || |
Sbjct 265532 TCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCAACTTCTAAAGTGATGGTCTTAC 265473
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || | ||||| || || | ||||| ||
Sbjct 265472 CAGTTAAGGTCTTGACAAAAATTTGCATCTT 265442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820253016827
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |