Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2 122 2e-22 seq5 116 9e-21 >seq2 Length=1335671 Score = 122 bits (134), Expect = 2e-22 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | ||||| || || || |||||||||||||| || | ||| ||||| || Sbjct 5054 TCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACC 4995 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||| | || || || ||||| | || || ||||| | | || |||||||| Sbjct 4994 GTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 4935 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| || ||||| |||||| | || | | |||| ||| || |||||||| ||||| Sbjct 4934 GTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCAAGGGTAAT 4875 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTA 152108 || || || || || || || ||||| | ||||||||| Sbjct 4874 GGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCATTTTA 4835 >seq5 Length=831479 Score = 116 bits (128), Expect = 9e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| || || |||||||||||||| |||| ||| ||||| || ||||||| Sbjct 265651 CAAG-TGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACCGTCTTCTA 265593 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || |||||||| | || || ||||| | | ||| |||||||| ||||| | Sbjct 265592 ATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTATCTTGGA 265533 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||||| ||||| | || | | | || ||| || ||||| | ||| || || || | Sbjct 265532 TCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCAACTTCTAAAGTGATGGTCTTAC 265473 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | ||||| || || | ||||| || Sbjct 265472 CAGTTAAGGTCTTGACAAAAATTTGCATCTT 265442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820253016827