Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2 154 3e-32 seq5 140 7e-28 seq6 122 2e-22 >seq2 Length=1335671 Score = 154 bits (170), Expect = 3e-32 Identities = 151/195 (77%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| | || | || || || | ||| || || ||||| Sbjct 5030 TTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 4971 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| || | |||||||||| |||||||| |||||||||||||||||| || || | Sbjct 4970 GATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTTTGCTTGACATT 4911 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| |||| ||||||||| || || || |||||||| || | || ||||| Sbjct 4910 GTCAATGGTGTCGGAAGATTCGACTTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAAC 4851 Query 283088 GAATATCTGCATTTT 283102 ||| || |||||||| Sbjct 4850 GAAAATTTGCATTTT 4836 >seq5 Length=831479 Score = 140 bits (154), Expect = 7e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | | || | || || |||| ||| || || || || Sbjct 265636 TTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAA 265577 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||||||| || ||||| ||||| |||||||||||| || ||| | Sbjct 265576 GATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTATCTTGGATCTTTTGCTTGACGTT 265517 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || || || |||| ||| ||||| | |||||| |||||||| || || ||||| || Sbjct 265516 GTCAATGGTATCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGAC 265457 Query 283088 GAATATCTGCATTTT 283102 || || ||||| || Sbjct 265456 AAAAATTTGCATCTT 265442 >seq6 Length=817167 Score = 122 bits (134), Expect = 2e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||||||||| | ||||||||| |||||||| |||||||| |||||||| | Sbjct 641783 CCCGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGGATCTTCTGT 641724 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || ||| | || || |||||||||| ||| || || || ||||| ||||| || || | Sbjct 641723 TTCACGTTGTCAATGGTGTCCGAAGATTCCACCTCAAGGGTGATGGTCTTGCCTGTAAGT 641664 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||||||||| |||||||| Sbjct 641663 GTCTTAACGAAAATCTGCAT 641644 Score = 104 bits (114), Expect = 5e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| | || || || | ||||| || ||||||||||| | ||||||||| ||| Sbjct 642540 AGCGTTCTTCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCAGGTGGA 642481 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| |||||||| || ||||| ||| || | || || ||||| || | || || Sbjct 642480 ATACCTTCCTTGTCCTGAATCTTCTGTTTCACATTGTCAATGGTGTCTGACGACTCCACC 642421 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || |||||||| | ||||| || || |||||||| Sbjct 642420 TCTAGGGTGATAGTTTTACCCGTAAGTGTCTTGACAAAGATCTGCAT 642374 Score = 102 bits (112), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| | ||| ||||||||| |||||||| || | ||||| | || |||||| Sbjct 643109 ACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTARTCYGAKAGCGTTCTTCCGTCCTCT 643050 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | ||||||||| |||||||| |||||||| || Sbjct 643049 AATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGA 642990 Query 283011 ATCTTTGCTTTTACGGTATCGAT 283033 ||||| ||| ||| | || || Sbjct 642989 ATCTTCTGTTTCACGTTGTCAAT 642967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738703780198