Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq2 154 3e-32
seq5 140 7e-28
seq6 122 2e-22
>seq2
Length=1335671
Score = 154 bits (170), Expect = 3e-32
Identities = 151/195 (77%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| | || | || || || | ||| || || |||||
Sbjct 5030 TTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 4971
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| || | |||||||||| |||||||| |||||||||||||||||| || || |
Sbjct 4970 GATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTTTGCTTGACATT 4911
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| ||||||||| || || || |||||||| || | || |||||
Sbjct 4910 GTCAATGGTGTCGGAAGATTCGACTTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAAC 4851
Query 283088 GAATATCTGCATTTT 283102
||| || ||||||||
Sbjct 4850 GAAAATTTGCATTTT 4836
>seq5
Length=831479
Score = 140 bits (154), Expect = 7e-28
Identities = 148/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | | || | || || |||| ||| || || || ||
Sbjct 265636 TTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAA 265577
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||||||| || ||||| ||||| |||||||||||| || ||| |
Sbjct 265576 GATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTATCTTGGATCTTTTGCTTGACGTT 265517
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || || || |||| ||| ||||| | |||||| |||||||| || || ||||| ||
Sbjct 265516 GTCAATGGTATCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGAC 265457
Query 283088 GAATATCTGCATTTT 283102
|| || ||||| ||
Sbjct 265456 AAAAATTTGCATCTT 265442
>seq6
Length=817167
Score = 122 bits (134), Expect = 2e-22
Identities = 111/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019
|| ||||||||||| | ||||||||| |||||||| |||||||| |||||||| |
Sbjct 641783 CCCGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGGATCTTCTGT 641724
Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079
|| ||| | || || |||||||||| ||| || || || ||||| ||||| || || |
Sbjct 641723 TTCACGTTGTCAATGGTGTCCGAAGATTCCACCTCAAGGGTGATGGTCTTGCCTGTAAGT 641664
Query 283080 GTCTTAACGAATATCTGCAT 283099
||||||||||| ||||||||
Sbjct 641663 GTCTTAACGAAAATCTGCAT 641644
Score = 104 bits (114), Expect = 5e-17
Identities = 123/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
||||| | || || || | ||||| || ||||||||||| | ||||||||| |||
Sbjct 642540 AGCGTTCTTCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCAGGTGGA 642481
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||| |||||||| || ||||| ||| || | || || ||||| || | || ||
Sbjct 642480 ATACCTTCCTTGTCCTGAATCTTCTGTTTCACATTGTCAATGGTGTCTGACGACTCCACC 642421
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || |||||||| | ||||| || || ||||||||
Sbjct 642420 TCTAGGGTGATAGTTTTACCCGTAAGTGTCTTGACAAAGATCTGCAT 642374
Score = 102 bits (112), Expect = 2e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||| | ||| ||||||||| |||||||| || | ||||| | || ||||||
Sbjct 643109 ACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTARTCYGAKAGCGTTCTTCCGTCCTCT 643050
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||||||||| | ||||||||| |||||||| |||||||| ||
Sbjct 643049 AATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGA 642990
Query 283011 ATCTTTGCTTTTACGGTATCGAT 283033
||||| ||| ||| | || ||
Sbjct 642989 ATCTTCTGTTTCACGTTGTCAAT 642967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738703780198
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |