Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq5 260 1e-64 >seq5 Length=831479 Score = 260 bits (288), Expect = 1e-64 Identities = 584/871 (67%), Gaps = 27/871 (3%) Strand=Plus/Minus Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299 |||| || || || |||||||| |||| || || |||||||| |||||||| ||||| | Sbjct 305261 TTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTTCCATGAAATCAAAAGGATTTG 305202 Query 23300 --AAGTATTATAT------ACAGCTTTACATGATAATTCCTTTAAAAGCCTATCTGCTAC 23351 | || ||| | ||| | || || || | ||| || || || || Sbjct 305201 TGACGTTGTATCTCTTGTCACAAC----CAAGAGAAACA----AGAAGTCTGTCGGCAAC 305150 Query 23352 AAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGC 23411 |||||| | |||||||||||||||||| | ||| ||||| | || || |||||| || Sbjct 305149 AAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGTTGGCTGGAAGAGC 305090 Query 23412 ATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTAT-TTGAACAATAACTT 23470 || || || || |||||| |||||| |||| || || |||| || | ||| Sbjct 305089 GTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGATCTTGAGCACGATCTT 305030 Query 23471 CTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGC 23530 || || | || || |||| || |||||||| |||||||| |||| | Sbjct 305029 GGAATCTGGG-GTATTGTTCAAATGGGAGAATAATAAACAAGCAAAATCGGTGTGTAAAC 304971 Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| || | ||| ||||| || |||||||| || |||||||| || |||| ||||| Sbjct 304970 CTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCTTTTTT 304911 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | ||| || || | |||||| |||||||| || || ||||| |||||||| ||||||| Sbjct 304910 TCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTTCAACAGCGGCAAAGG 304851 Query 23651 CCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAG 23710 | || | | | ||| ||| |||||| | ||| | |||||| | | | ||| | | Sbjct 304850 CAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATCTCATGGCCCAGTCGG 304791 Query 23711 CCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCAT 23770 |||| ||| | ||| ||| ||||||| || || || | || || ||| | Sbjct 304790 CCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGAA---TTCCGATTCCT 304734 Query 23771 T---ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAA 23827 | ||| | | ||| || ||||| | ||| || |||| ||||| || ||||| | Sbjct 304733 TTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTTTCCA 304674 Query 23828 TAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATC 23887 | || || || ||||| ||||| | ||||||| | ||| || ||| | || Sbjct 304673 TCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAGAAGT 304614 Query 23888 TTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATT 23947 ||| | | ||||||||||| ||||||||||| ||||||||| || || | || Sbjct 304613 TTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACTCTGG 304554 Query 23948 TTATAAAATGTCTTTC---ATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATA 24004 | || ||| |||||| |||| || | || ||||| || | | || || || | Sbjct 304553 TAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTTAGACA 304494 Query 24005 AATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATAT 24064 | |||| ||| || | ||||| ||| || ||| || |||||| |||| || | Sbjct 304493 AGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCAGATTT 304434 Query 24065 CATTATGTTGTATTGGAAATATTACGAATCT 24095 ||| | || ||||| || | || ||||| Sbjct 304433 CATGGTATTTGATTGGGAAGAGCACAAATCT 304403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487758811800