Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq5 260 1e-64
>seq5
Length=831479
Score = 260 bits (288), Expect = 1e-64
Identities = 584/871 (67%), Gaps = 27/871 (3%)
Strand=Plus/Minus
Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299
|||| || || || |||||||| |||| || || |||||||| |||||||| ||||| |
Sbjct 305261 TTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTTCCATGAAATCAAAAGGATTTG 305202
Query 23300 --AAGTATTATAT------ACAGCTTTACATGATAATTCCTTTAAAAGCCTATCTGCTAC 23351
| || ||| | ||| | || || || | ||| || || || ||
Sbjct 305201 TGACGTTGTATCTCTTGTCACAAC----CAAGAGAAACA----AGAAGTCTGTCGGCAAC 305150
Query 23352 AAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGC 23411
|||||| | |||||||||||||||||| | ||| ||||| | || || |||||| ||
Sbjct 305149 AAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGTTGGCTGGAAGAGC 305090
Query 23412 ATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTAT-TTGAACAATAACTT 23470
|| || || || |||||| |||||| |||| || || |||| || | |||
Sbjct 305089 GTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGATCTTGAGCACGATCTT 305030
Query 23471 CTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGC 23530
|| || | || || |||| || |||||||| |||||||| |||| |
Sbjct 305029 GGAATCTGGG-GTATTGTTCAAATGGGAGAATAATAAACAAGCAAAATCGGTGTGTAAAC 304971
Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590
||||||| || | ||| ||||| || |||||||| || |||||||| || |||| |||||
Sbjct 304970 CTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCTTTTTT 304911
Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650
| | ||| || || | |||||| |||||||| || || ||||| |||||||| |||||||
Sbjct 304910 TCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTTCAACAGCGGCAAAGG 304851
Query 23651 CCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAG 23710
| || | | | ||| ||| |||||| | ||| | |||||| | | | ||| | |
Sbjct 304850 CAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATCTCATGGCCCAGTCGG 304791
Query 23711 CCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCAT 23770
|||| ||| | ||| ||| ||||||| || || || | || || ||| |
Sbjct 304790 CCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGAA---TTCCGATTCCT 304734
Query 23771 T---ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAA 23827
| ||| | | ||| || ||||| | ||| || |||| ||||| || ||||| |
Sbjct 304733 TTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTTTCCA 304674
Query 23828 TAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATC 23887
| || || || ||||| ||||| | ||||||| | ||| || ||| | ||
Sbjct 304673 TCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAGAAGT 304614
Query 23888 TTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATT 23947
||| | | ||||||||||| ||||||||||| ||||||||| || || | ||
Sbjct 304613 TTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACTCTGG 304554
Query 23948 TTATAAAATGTCTTTC---ATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATA 24004
| || ||| |||||| |||| || | || ||||| || | | || || || |
Sbjct 304553 TAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTTAGACA 304494
Query 24005 AATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATAT 24064
| |||| ||| || | ||||| ||| || ||| || |||||| |||| || |
Sbjct 304493 AGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCAGATTT 304434
Query 24065 CATTATGTTGTATTGGAAATATTACGAATCT 24095
||| | || ||||| || | || |||||
Sbjct 304433 CATGGTATTTGATTGGGAAGAGCACAAATCT 304403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487758811800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |