Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 1e-24
seq5 111 1e-19
seq6 98.7 7e-16
>seq2
Length=1335671
Score = 127 bits (140), Expect = 1e-24
Identities = 169/231 (73%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| |||||| || | |||||| ||| ||||||||||||||||| || |
Sbjct 5065 CCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAT 5006
Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| ||| | |||| |||| ||||| || |||||||| || | || || || | |
Sbjct 5005 AAGGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTG 4948
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | ||||||||| || ||||| ||||| || ||| | |||||||||| |||||
Sbjct 4947 GAATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTGT--CAATGGTGTCGGAAGATTC 4890
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| ||||| || || ||||| || ||||| ||||||||
Sbjct 4889 GACTTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCAT 4839
>seq5
Length=831479
Score = 111 bits (122), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||| | ||||||||||| |||||| ||| ||||||||||||||||| |||
Sbjct 265674 ATACCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCG 265615
Query 44168 GCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| | ||| | |||| || | ||||| || || |||||||| | || || || |
Sbjct 265614 GATAAGGTT--CTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAG 265557
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285
|| | ||||||||| || ||||| ||||| | | | ||||| || | ||||
Sbjct 265556 GTGGGATACCTTCCTTATCTTGGATCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATT 265497
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || | || || ||||| || || | |||||| || || ||||||||
Sbjct 265496 CAACTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 265445
>seq6
Length=817167
Score = 98.7 bits (108), Expect = 7e-16
Identities = 116/157 (74%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 44181 CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCT 44240
|||| |||| ||| || || ||||||||||| | ||| || || | || | ||||||||
Sbjct 642530 CGTCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCT 642471
Query 44241 TTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAA 44300
| ||| |||||||| |||| | | |||||||| | || |||||||| | || |
Sbjct 642470 TGTCCTGAATCTTCTGTTTCACATTGTCAATGGTGTCTGACGACTCCACCTCTAGGGTGA 642411
Query 44301 TCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || || ||||| || ||||| || ||||| |||||
Sbjct 642410 TAGTTTTACCCGTAAGTGTCTTGACAAAGATCTGCAT 642374
Score = 91.5 bits (100), Expect = 1e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257
|| ||||||||||| | ||| || || | || | ||||||||| ||| ||||||||
Sbjct 641783 CCCGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGGATCTTCTGT 641724
Query 44258 TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGG 44317
|||| | | |||||||| | ||||||||||| | || || ||||| || || ||
Sbjct 641723 TTCACGTTGTCAATGGTGTCCGAAGATTCCACCTCAAGGGTGATGGTCTTGCCTGTAAGT 641664
Query 44318 GTCTTCACGAAGATTTGCAT 44337
||||| ||||| || |||||
Sbjct 641663 GTCTTAACGAAAATCTGCAT 641644
Score = 87.8 bits (96), Expect = 1e-12
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| ||||||||||| || || ||| || ||||| |||||||| || |
Sbjct 643127 CCACCTCTCAATCTCAACACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTARTCYGAK 643068
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| | |||| || | ||||| || ||||||||||| | ||| || || | ||
Sbjct 643067 AGCGTTCTTCCGTCCTCTAATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCAGGTGGA 643008
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCA 44261
| ||||||||| ||| |||||||| ||||
Sbjct 643007 ATACCTTCCTTGTCCTGAATCTTCTGTTTCA 642977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990237666829
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |