Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 1e-26
seq6 125 2e-23
>seq2
Length=1335671
Score = 136 bits (150), Expect = 1e-26
Identities = 168/229 (73%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 177914 TAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA 177973
|||||||| |||||||||| ||||| || || || || || || ||||| || || ||
Sbjct 4835 TAAAATGC---AAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGA 4891
Query 177974 AAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCC 178033
| || |||||||| || || ||||| |||||||| || ||||| ||||| || || ||
Sbjct 4892 ATCTTCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACC 4951
Query 178034 GGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGA 178093
||||| ||| || | ||||| || || || || | ||||| || || || | | ||
Sbjct 4952 TGACCAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGA 5011
Query 178094 TTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||| ||||||| ||||| || || || | || |||||| | |||
Sbjct 5012 CTACAACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGA 5060
>seq6
Length=817167
Score = 125 bits (138), Expect = 2e-23
Identities = 126/164 (77%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || || || || ||||| |||||||| |||||||| ||||||
Sbjct 642377 CAGATCTTTGTCAAGACACTTACGGGTAAAACTATCACCCTAGAGGTGGAGTCGTCAGAC 642436
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||||| |||||||||||||| ||||| || || || ||||| ||
Sbjct 642437 ACCATTGACAATGTGAAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAACAG 642496
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087
|| | ||||| || || |||||| | ||||| ||||| || ||
Sbjct 642497 AGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGAAGAACGCT 642540
Score = 107 bits (118), Expect = 5e-18
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046
|| || ||||| ||||| |||||||||||||| ||||| || || || ||||| || ||
Sbjct 642967 ATTGACAACGTGAAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAACAGAGA 643026
Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106
| ||||| || || || || | || || ||||| || || | || || ||| | |||
Sbjct 643027 TTGATCTTTGCGGGTAAGCAATTAGAGGACGGAAGAACGCTMTCRGAYTACAACATTCAA 643086
Query 178107 AAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||||| ||||| ||| | || |||||| | |||
Sbjct 643087 AAAGAATCCACACTCCATTTGGTGTTGAGATTGAGA 643122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730629356178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |