Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 5e-20
>seq1
Length=2842153
Score = 113 bits (124), Expect = 5e-20
Identities = 207/298 (69%), Gaps = 4/298 (1%)
Strand=Plus/Plus
Query 54047 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 54105
||||| ||||| ||||| ||| || | |||||||| || ||||| || || ||
Sbjct 1668696 TCAGGGATCCATAGAGC-ATAGAACATATCTCTGGCCCTCAAGTCCTCTTTACCATAGTT 1668754
Query 54106 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCAT 54165
|| || | |||||||| | ||||||| |||||| |||||||||||| ||
Sbjct 1668755 TTTCTTCATGTCGAGGAATTGTAAGATATCAGCATGCCATGGTTCCAAGTATGCACAGAT 1668814
Query 54166 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 54225
||||||| | | |||| ||||| ||||| | ||| |||| || |||| | ||||
Sbjct 1668815 GGCTCCAGGTCTTCTGTTGCCTCCTTGATCAACGTACTTAGCCGTTGTATTGAACACTCG 1668874
Query 54226 CAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGC 54285
|| ||| || |||||| || |||| || || || ||||| ||||||||| ||
Sbjct 1668875 CAGCATCGGTGCAATACCGCTGCTCACACCGTTAGTGCCAGAGATGTAGCTTCCAGCAGC 1668934
Query 54286 ACGAATATTACTAAT-TGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCA 54342
||||| ||||| || ||| | ||| || || |||| ||| ||||| | ||| ||
Sbjct 1668935 TCGAATGTTACTGATATGA-ACACCAATTCCTCCTGATGCTTTTGAGATCATTGCACA 1668991
Score = 109 bits (120), Expect = 7e-19
Identities = 352/545 (65%), Gaps = 6/545 (1%)
Strand=Plus/Minus
Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190
|| |||| ||||| || || | ||| |||| || | ||||| | ||||| || ||
Sbjct 870745 ATGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTACCACCT 870686
Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250
|| || | ||| | || ||||| || | || | | ||||||||| ||||| |||||
Sbjct 870685 TGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGGAA 870626
Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 54310
| ||| ||||| |||| || || ||| ||||||| || || || | |||
Sbjct 870625 GTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAACCG 870566
Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 54370
|| || || || | || ||||| | || || | || || ||||| ||||| || ||
Sbjct 870565 ATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTTCG 870506
Query 54371 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 54430
|| || ||| ||||| || | || || |||||||| |||| ||| ||
Sbjct 870505 ATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAGTACCG 870446
Query 54431 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 54490
|| || || | || || ||||||||||| || | || || | || ||||| |||
Sbjct 870445 GCGTTGAACAGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTAAGTC 870386
Query 54491 TCGATAGCTGAGTCTA---TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 54547
|||| || || | | ||| | || | || | || || | ||| | ||||
Sbjct 870385 TCGAGGACTTTTTCAATGTTGTCCGA---GTGGACACCAATGGCAACTCTCATGATCATG 870329
Query 54548 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTT 54607
||||||||||| || | | || || | | |||| | ||| || |||| ||
Sbjct 870328 TGCTGAGGTCTCTCGGCAACTTTACCGTCGACTCTCAGAAGGTAAGAACGCTCCAGGGTC 870269
Query 54608 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTA 54667
|| || ||||| |||||||| ||||| || ||||| | || | ||||| || |
Sbjct 870268 TTGAATCCAAAGTAGTTGTACTGGAAGTCGCGATCGTAGTTGATGGCGGAGTTCAGGACA 870209
Query 54668 TCCTT 54672
|||||
Sbjct 870208 TCCTT 870204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721488677200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |