Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq4 104 3e-17 >seq4 Length=1514682 Score = 104 bits (114), Expect = 3e-17 Identities = 338/523 (65%), Gaps = 23/523 (4%) Strand=Plus/Plus Query 145583 CCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGA 145642 ||| | |||||||||| | | |||||||||||||| ||| ||| |||| | | Sbjct 615898 CCACCTCAAAGTCCTCAAACTTAAAGTCATCTATGTCAGTGACCTTCCTGTTGATCTTCA 615957 Query 145643 GCCT-GGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTG 145701 | | ||||||| | || ||| | | | ||| |||| || | || || || | | Sbjct 615958 ACTTCGGGAAAGCCCTTGGAACTCTTTG-AATCTGCTGCTTGAGAGCATCGACATGATCG 616016 Query 145702 AGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGG 145761 ||||| ||| | ||| |||| |||||| ||||| || || || || | | || Sbjct 616017 CAGTAGATGTGAGAGTCTCCCATGACGTGAATGAACTCACCAGGGTCCATATCGACGACC 616076 Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 ||| | ||| ||||| ||||| | ||| ||| |||||||| || || || |||||| Sbjct 616077 ATGGCTATCATATAGGTGAGCAGAGCGTACGAGGCGATGTTGAACGGAACGCCGAGCCCC 616136 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCT---CCCCGCCCGC---------- 145868 || || | || |||||||||| ||| ||||| |||| | ||| | Sbjct 616137 ATATCACAGGATCGCTGGTACATCTGACAGGACAGCTTTGGACGGCCTTCTTTAGGGAAA 616196 Query 145869 --CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCC 145926 |||||||||||||| | || ||||| || ||||| ||||| | | | | | Sbjct 616197 CTGACGTAGAACTGGCAGAAGACATGGCAAGGTGGCAGAGCCATCTCTTTGAAAGCGGGC 616256 Query 145927 GGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCT 145983 || ||||| || | ||| | || ||| || ||| ||||| |||||| Sbjct 616257 GGATTCCAAGCAGAGAGAAGGA---TCCGGCGGTCGTATGGGTTGGTCTTGAGTGTATGG 616313 Query 145984 ATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTAC 146043 || | || | ||| || ||||| || |||||| || | | || ||||| Sbjct 616314 ATGATGTTAGCAATCTGATCATAGCCCTTGCCAGTGTAATCGGTGTCACAATCGACGTAT 616373 Query 146044 GCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCA 146086 |||| ||||| || | ||| |||||||| || ||||| |||| Sbjct 616374 TCGGCGCCGAAATGACGCCATTGGAACCCATAAACGGGACCCA 616416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076689360600