Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq4 116 3e-21
seq3 113 4e-20
>seq4
Length=1514682
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || ||||||| || | ||||||||||| || ||||| ||||| |
Sbjct 89140 CCACCTCTGAGTCTAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAA 89199
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| | |||| |||| ||| || || ||| | ||||||||||||||||| ||
Sbjct 89200 AGGGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGA 89259
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || |||||| || || || | ||| ||| || || |||| |
Sbjct 89260 ATGCCCTCCTTATCCTGGATCTTCTGCTTGACGTTATCGATAGTGTCGGAGGACTCCACT 89319
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || || ||||| || || || || ||||| || || |||||
Sbjct 89320 TCAAGAGTGATTGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 89366
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| |||| ||| || || |||| || | ||||||||||| |||||||| ||||| |
Sbjct 1333657 TTCCACCTCTCAGTCTAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAG 1333598
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| ||| | ||||||| ||||| || || || | ||||||||||||||||| |
Sbjct 1333597 AAAGAGTTCTGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAG 1333538
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || |||||||| |||||| || || || | | | | || || | ||||
Sbjct 1333537 GAATTCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCCA 1333478
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||| ||||| | || ||||| || || |||||
Sbjct 1333477 CCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTGACGAAAATCTGCAT 1333429
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || ||||| |||| || | || ||||||||||| ||||| || || |
Sbjct 89368 CCACCTCTCAATCTGAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGGAA 89427
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| | | ||||||| ||| || || ||| | ||||| | |||||||| ||
Sbjct 89428 AGGGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGG 89487
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||| || ||||||||| || || | | | | || || || |||
Sbjct 89488 ATACCTTCCTTATCCTGGATCTTTTGCTTGACGTTGTCAATGGTGTCTGAGGACTCAACC 89547
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || |||||||| || || | || ||||| || || |||||
Sbjct 89548 TCGAGTGTGATGGTCTTACCTGTGAGGGTCTTGACGAAGATCTGCAT 89594
>seq3
Length=1705961
Score = 113 bits (124), Expect = 4e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||| || || |||| || | ||| |||||||| || ||||| |||||||
Sbjct 1462856 CCACCTCTCAGTCTCAGAACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1462797
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||||| ||| || || || | ||||||||||||||||| ||
Sbjct 1462796 AGGGTACGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCAGGTGGG 1462737
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| || || || | | | | || || | |||
Sbjct 1462736 ATTCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCAACC 1462677
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180
|| | ||| || ||||| ||||| | ||||| || || || ||||| ||||
Sbjct 1462676 TCGAGGGTGATCGTCTTTCCGGTAAGGGTTTTAACGAAAATCTGCATCTTGA 1462625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422259122805740
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |