Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq4 255 6e-63
seq3 123 3e-23
>seq4
Length=1514682
Score = 255 bits (282), Expect = 6e-63
Identities = 421/603 (70%), Gaps = 7/603 (1%)
Strand=Plus/Minus
Query 116602 CCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGA 116661
|||||| || || ||||| || | ||| ||||| ||| |||||||| ||||||||
Sbjct 729301 CCGGTTTGTCATGTTCCCTATCAAGTACAGCGACATCTGGGAGATGTACAAGAAGGCCGA 729242
Query 116662 GGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCG 116721
||| || ||||||||| ||||||| | ||| |||| ||||| || ||||||| |
Sbjct 729241 GGCCTCTTTCTGGACCACCGAGGAGATCGACTTGTCTAAGGATCTGATCGACTGGAACAC 729182
Query 116722 C---TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAG 116778
| ||||||| ||||||| | | |||||| || ||||| || || ||||||||
Sbjct 729181 CAAGTTGAACGCCAACGAGAGATACTTCATCTCGCGTGTGCTCGCATTCTTCGCCGCTTC 729122
Query 116779 CGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGA 116838
|||||| |||||| ||||||| || | || ||| || ||||| ||| || | ||
Sbjct 729121 CGACGGTATCGTCGACGAGAACTTGTGCCAGAACTTCACTACTGAGGTTCAGATGCCAGA 729062
Query 116839 GGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTC 116898
||| || |||||||||||| |||||| |||||||| | ||||| || | || ||
Sbjct 729061 GGCCCGTGCCTTCTACGGCTTCCAGATCATGGTGGAGAACATCCACTCCGAGACTTACTC 729002
Query 116899 GACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGC--TCCGTTTGTTGAACGCC 116956
|| |||||||| ||| | | | | | | | || || | ||||| | |||
Sbjct 729001 CGTGCTGATCGACACCTACAT-CAC-CGACAAAAGCGAGGCCAACTACTTGTTTGAGGCC 728944
Query 116957 ATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGC 117016
||||||| || || |||| ||||||||| ||||| | | ||||| | |
Sbjct 728943 ATCGAGAACATCCCACCTATCAAGGAGAAGGCCCTCTGGGCCGTCAGATGGATGGAGAAC 728884
Query 117017 AGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTT 117076
| || ||| | || ||||| ||| | |||| ||| ||| |||| || |||||||
Sbjct 728883 AAGGACGCCCTTTACGCTGAGCGTCTGATCGCCTACGCTGCCATCGAAGGTATCTTCTTC 728824
Query 117077 TCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACT 117136
|| || ||||| | || || ||||||||||| | || |||||||| || || ||
Sbjct 728823 TCAGGATCGTTCGCTTCGATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCAGGTCTCACC 728764
Query 117137 TTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTG 117196
||| |||||||||||||| ||| || ||||| |||| |||||| ||||| || ||
Sbjct 728763 TTCTCCAACGAGCTCATCTGCAGAGATGAGGGCTTGCACACCGACTTCGCCTGCTTACTC 728704
Query 117197 TTC 117199
|||
Sbjct 728703 TTC 728701
Score = 109 bits (120), Expect = 6e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| || || |||||||| |||| || || || |
Sbjct 89594 ATGCAGATCTTCGTCAAGACCCTCACAGGTAAGACCATCACACTCGAGGTTGAGTCCTCA 89535
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| |||| || | || || || || ||||| | |||||
Sbjct 89534 GACACCATTGACAACG-TCAAGCAAAAGATCCAGGATAAGGAAGGTATCCCACCAGACCA 89476
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| || |||| || || || ||| |||| || | | ||||| ||| |||||
Sbjct 89475 GCAACGTCTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACCCTTTCCGATTACAA 89416
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
|||||| |||||| | ||||| ||
Sbjct 89415 CATCCAAAAGGAGTCTACGCTCCA 89392
Score = 109 bits (120), Expect = 6e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || || || ||||||||| |||| || || | ||
Sbjct 1333429 ATGCAGATTTTCGTCAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCC 1333488
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| | || || | ||||| ||||| || || | |||||
Sbjct 1333489 GACACCATTGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGAATTCCTCCAGACCA 1333547
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| |||| |||| ||| || || ||||| || |||| | || || ||||||||
Sbjct 1333548 GCAGAGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACTACAA 1333607
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||| ||||||||| |||| || ||
Sbjct 1333608 CATTCAGAAGGAGTCCACCCTCCA 1333631
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || || ||||| | || || || || ||
Sbjct 89366 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACAATCACTCTTGAAGTGGAGTCCTCC 89307
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| | || || | || || |||||||| || | |||||
Sbjct 89306 GACACTATCGATAACG-TCAAGCAGAAGATCCAGGATAAGGAGGGCATTCCACCAGACCA 89248
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| |||| |||| || || || ||| |||| |||| | ||||| ||||||||
Sbjct 89247 GCAGAGACTTATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCCTTTCAGACTACAA 89188
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| |||| || ||
Sbjct 89187 CATCCAGAAGGAGTCCACCCTCCA 89164
Score = 91.5 bits (100), Expect = 2e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || || ||||| | || || || || ||
Sbjct 88910 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACAATCACTCTTGAAGTGGAGTCCTCC 88851
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| | || || | || || || || ||||| | |||||
Sbjct 88850 GACACCATCGATAACG-TCAAGCAGAAGATCCAGGATAAGGAAGGTATCCCACCAGACCA 88792
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| || |||| ||| || || ||| |||| || | | ||||| ||||||||
Sbjct 88791 GCAACGTCTTATCTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACCCTTTCAGACTACAA 88732
Query 40869 CATCCAGAAGGA 40880
||||||||||||
Sbjct 88731 CATCCAGAAGGA 88720
Score = 91.5 bits (100), Expect = 2e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || || || || ||||| |||| |||||| | |
Sbjct 89138 ATGCAGATCTTCGTCAAGACTCTTACTGGTAAGACTATCACGCTCGAGGTCGAATCTTCG 89079
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||||| | || || | || || || || ||||| | ||||||
Sbjct 89078 GACACCATTGACAATGTCAAGCAGAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAG 89019
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| || |||| || || || ||| |||| || | || ||||| |||||||||
Sbjct 89018 CAACGTCTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGGACCCTTTCTGACTACAAC 88959
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|| ||||| || |||| || ||
Sbjct 88958 ATTCAGAAAGAATCCACTCTCCA 88936
>seq3
Length=1705961
Score = 123 bits (136), Expect = 3e-23
Identities = 153/207 (74%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| ||||| || || || || || |||||| |||| || || |
Sbjct 1462627 AAGATGCAGATTTTCGTTAAAACCCTTACCGGAAAGACGATCACCCTCGAGGTTGAGTCT 1462686
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|||||| | | | |||| ||||| | || || | ||||| ||||| ||||| | ||
Sbjct 1462687 TCCGACACCATTGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCACCTGA 1462745
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| |||| |||| ||| || || ||| |||| |||| || ||||| |||||
Sbjct 1462746 CCAGCAGAGACTTATCTTCGCTGGTAAGCAGTTGGAGGACGGCCGTACCCTTTCGGACTA 1462805
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||||||| | || || ||
Sbjct 1462806 CAACATCCAGAAGGAGTCGACTCTCCA 1462832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219103396400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |