Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq4 123 3e-23
seq3 98.7 1e-15
>seq4
Length=1514682
Score = 123 bits (136), Expect = 3e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
||||| || | ||| |||||| ||||| ||||| |||| ||||| | |||| ||
Sbjct 1333637 ACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 1333578
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
||||||||||| ||||| || |||| ||||||||| | || | | |||||||||| |
Sbjct 1333577 AGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGG 1333518
Query 43095 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
|| || || |||| ||| | | | |||||| || ||||| |||| |||||||| ||
Sbjct 1333517 ATCTTCTGCTTGA-CGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTT 1333459
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || ||||| || || || |||||
Sbjct 1333458 ACCGGTCAGGGTCTTGACGAAAATCTGCAT 1333429
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| || | ||| |||||| || || ||||| || | || || | |||| ||
Sbjct 89157 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAAAGGGTTCTGCCGTCTTC 89216
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
| |||||||||||| || || |||| ||||||||| | || | || |||||| |||
Sbjct 89217 CAACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCCTG 89276
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
||| || || |||| | | | |||||| || ||||| || | ||||| || ||
Sbjct 89277 GATCTTCTGCTTGACGTTATCGATAGTGTCGGAGGACTCCACTTCAAGAGTGATTGTCTT 89336
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || | ||||| || ||||| |||||
Sbjct 89337 ACCAGTCAAGGTCTTGACGAAGATCTGCAT 89366
>seq3
Length=1705961
Score = 98.7 bits (108), Expect = 1e-15
Identities = 141/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || | || || || |||| || | |||||||||||||||
Sbjct 1462821 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCCAACTGCTTACCAGCGAA 1462762
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| |||| ||||||||| | || | | |||||||||| ||| || || |||| |||
Sbjct 1462761 GATAAGTCTCTGCTGGTCAGGTGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTGA-CGT 1462703
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||| || || || |||| ||||| || || || || || || || |
Sbjct 1462702 TGTCAATGGTGTCGGAAGACTCAACCTCGAGGGTGATCGTCTTTCCGGTAAGGGTTTTAA 1462643
Query 43171 CAAAGATTTGCATTTT 43186
| || || ||||| ||
Sbjct 1462642 CGAAAATCTGCATCTT 1462627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571817492784200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |