Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq4 96.9 3e-15
>seq4
Length=1514682
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167
|||||||| |||| ||| || || || || || || ||||||||||| | | ||| |
Sbjct 89149 AGTCTAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAAAGGGTTCTG 89208
Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227
| |||||||| || || || ||| |||||||||| || || || || | ||| |||
Sbjct 89209 CCGTCTTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGAATGCCCTCC 89268
Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287
||||| || | |||||||| | | | |||||| || ||| ||||| |||
Sbjct 89269 TTATCCTGGATCTTCTGCTTGACGTTATCGATAGTGTCGGAGGACTCCACTTCAAGAGTG 89328
Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | || || ||||| || || || || || |||||
Sbjct 89329 ATTGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 89366
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167
|||||||| |||| ||| ||||| ||||| || || ||||||||||| | | ||| |
Sbjct 88693 AGTCTAAGGACCAAGTGGAGTGTAGATTCCTTCTGGATGTTGTAGTCTGAAAGGGTTCTG 88752
Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227
| ||| ||||| || || || || ||||||| | ||| || || || | ||||||
Sbjct 88753 CCATCCTCCAACTGCTTACCGGCGAAGATAAGACGTTGCTGGTCTGGTGGGATACCTTCC 88812
Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287
||||| || | |||||||| | | | ||||| || ||| ||||| |||
Sbjct 88813 TTATCCTGGATCTTCTGCTTGACGTTATCGATGGTGTCGGAGGACTCCACTTCAAGAGTG 88872
Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | || || ||||| || || || || || |||||
Sbjct 88873 ATTGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 88910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343930651175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |