Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 3e-23
>seq1
Length=2842153
Score = 123 bits (136), Expect = 3e-23
Identities = 339/518 (65%), Gaps = 6/518 (1%)
Strand=Plus/Minus
Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428
|| |||| ||||| || || | ||| ||||| || | ||||| | ||||| || ||
Sbjct 870745 ATGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTACCACCT 870686
Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488
|| || | ||| | || ||||| || | || | | ||||||||| |||||||| ||
Sbjct 870685 TGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGGAA 870626
Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCT 63548
|||| |||||||||| || || ||| ||||||| || || || | |||
Sbjct 870625 GTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAACCG 870566
Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCT 63608
||||| || || | || ||||| | || || | || || || || ||||| |||||
Sbjct 870565 ATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTTCG 870506
Query 63609 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668
||| || || ||||| || | || || |||||||| |||| | ||| ||
Sbjct 870505 ATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAGTACCG 870446
Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728
|| || || | || || ||||||||||| || | || || | || ||||| |||
Sbjct 870445 GCGTTGAACAGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTAAGTC 870386
Query 63729 TCAATAGCTGAGTCTA---TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63785
|| | || || | | ||| | || | || | || || | ||| | ||||
Sbjct 870385 TCGAGGACTTTTTCAATGTTGTCCGA---GTGGACACCAATGGCAACTCTCATGATCATG 870329
Query 63786 TGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63845
||||||||||| || ||| ||| || | | ||| | ||| || |||| ||
Sbjct 870328 TGCTGAGGTCTCTCGGCAACTTTACCGTCGACTCTCAGAAGGTAAGAACGCTCCAGGGTC 870269
Query 63846 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 63883
|| || ||||| |||||||| ||||| || |||||
Sbjct 870268 TTGAATCCAAAGTAGTTGTACTGGAAGTCGCGATCGTA 870231
Score = 109 bits (120), Expect = 7e-19
Identities = 206/298 (69%), Gaps = 4/298 (1%)
Strand=Plus/Plus
Query 63285 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATT 63343
||||| ||||| ||||| ||| || | |||||| | || ||||| || || ||
Sbjct 1668696 TCAGGGATCCATAGAGC-ATAGAACATATCTCTGGCCCTCAAGTCCTCTTTACCATAGTT 1668754
Query 63344 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63403
|| || | |||||||| | ||||||| |||||| |||||||||||| ||
Sbjct 1668755 TTTCTTCATGTCGAGGAATTGTAAGATATCAGCATGCCATGGTTCCAAGTATGCACAGAT 1668814
Query 63404 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63463
||||||| | | |||| ||||| ||||| | ||| |||| || |||| | ||||
Sbjct 1668815 GGCTCCAGGTCTTCTGTTGCCTCCTTGATCAACGTACTTAGCCGTTGTATTGAACACTCG 1668874
Query 63464 CAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGC 63523
|| ||| || ||||||| | | ||| || || || ||||| |||| |||| ||
Sbjct 1668875 CAGCATCGGTGCAATACCGCTGCTCACACCGTTAGTGCCAGAGATGTAGCTTCCAGCAGC 1668934
Query 63524 ACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63580
||||| ||||| || ||| | ||| ||||| |||| ||| ||||| | ||| ||
Sbjct 1668935 TCGAATGTTACTGATATGA-ACACCAATTCCTCCTGATGCTTTTGAGATCATTGCACA 1668991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817481909200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |