Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=2842153 Score = 87.8 bits (96), Expect = 2e-12 Identities = 222/338 (66%), Gaps = 0/338 (0%) Strand=Plus/Minus Query 38113 TCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCA 38172 ||||| || |||||||||||||| || | || || | || || || ||||| || | | Sbjct 870751 TCGAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTA 870692 Query 38173 CCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCA 38232 || || || | | || | | ||||| || | | | | ||| || | ||||| Sbjct 870691 CCACCTTGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCG 870632 Query 38233 TTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGAC 38292 || || | ||||| |||||| || |||| || | || || || || || | Sbjct 870631 TTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGC 870572 Query 38293 AATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATA 38352 || || |||||||| || || || || | ||| || || || || ||||| | ||| Sbjct 870571 AAACCGATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATA 870512 Query 38353 CCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGA 38412 ||||| || ||| ||||| || | | | || ||| ||||||||||| |||| Sbjct 870511 CCTTCGATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGA 870452 Query 38413 GTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAA 38450 || |||||||| || | || || || || || |||| Sbjct 870451 GTACCGGCGTTGAACAGAGTTGGCGAAGCGTGCGTGAA 870414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524712151600