Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 2e-12
>seq1
Length=2842153
Score = 87.8 bits (96), Expect = 2e-12
Identities = 222/338 (66%), Gaps = 0/338 (0%)
Strand=Plus/Minus
Query 38113 TCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCA 38172
||||| || |||||||||||||| || | || || | || || || ||||| || | |
Sbjct 870751 TCGAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTA 870692
Query 38173 CCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCA 38232
|| || || | | || | | ||||| || | | | | ||| || | |||||
Sbjct 870691 CCACCTTGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCG 870632
Query 38233 TTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGAC 38292
|| || | ||||| |||||| || |||| || | || || || || || |
Sbjct 870631 TTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGC 870572
Query 38293 AATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATA 38352
|| || |||||||| || || || || | ||| || || || || ||||| | |||
Sbjct 870571 AAACCGATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATA 870512
Query 38353 CCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGA 38412
||||| || ||| ||||| || | | | || ||| ||||||||||| ||||
Sbjct 870511 CCTTCGATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGA 870452
Query 38413 GTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAA 38450
|| |||||||| || | || || || || || ||||
Sbjct 870451 GTACCGGCGTTGAACAGAGTTGGCGAAGCGTGCGTGAA 870414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524712151600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |