Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 2e-19
>seq1
Length=2842153
Score = 111 bits (122), Expect = 2e-19
Identities = 374/573 (65%), Gaps = 22/573 (4%)
Strand=Plus/Plus
Query 65812 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 65871
|||| |||||||| || || | ||| || || ||| || |||||||| ||||| |
Sbjct 1668430 ACTTAATGGTTCCCAAGTTCTTTTGGTTCGATTTCCGGTTGCATGCATCCTTGTAAAGCA 1668489
Query 65872 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC------GACTC 65925
||||||||||||| || || |||| || | || |||| | ||| || | | |
Sbjct 1668490 TGAATGGAGTACCTGTCTCTGTCTGCGAGTATAGAATCTTCTCCCACACTTTCCTGGCAC 1668549
Query 65926 GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGA 65985
|| | | || || || | ||| | || ||||| | |||| | ||||
Sbjct 1668550 GAACTGT----ATCCATCTGAAGTCCTTCTGCCT--CGTATTTTTGGTACAGTGCATCGA 1668603
Query 65986 ACTCGTCTCCCCAAACATTGTCCAATCCAGGA-CATT--CATCCGGACACATCAACGACC 66042
| || || || | |||| ||||||||| || | | |||| | ||| | |
Sbjct 1668604 ATTCCTCCCCATACACATCAGACAATCCAGGTGCAGTATCTTCCGAAAACAGGCTC---C 1668660
Query 66043 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AAT 66101
| ||| ||| | | || || ||| || | ||||| ||||| ||||| ||| ||
Sbjct 1668661 AGTCTTGGTCGGCTTCAACACGACGCATGAACAAGTCAGGGATCCATAGAGC-ATAGAAC 1668719
Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161
| |||||||| || ||||| || || || || || | |||||||| |
Sbjct 1668720 ATATCTCTGGCCCTCAAGTCCTCTTTACCATAGTTTTTCTTCATGTCGAGGAATTGTAAG 1668779
Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221
|||||| |||||| |||||||||||| || ||||||| | | |||| |||||
Sbjct 1668780 ATATCAGCATGCCATGGTTCCAAGTATGCACAGATGGCTCCAGGTCTTCTGTTGCCTCCT 1668839
Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281
||||| | ||| |||| || |||| | |||| || ||| || |||||| ||
Sbjct 1668840 TGATCAACGTACTTAGCCGTTGTATTGAACACTCGCAGCATCGGTGCAATACCGCTGCTC 1668899
Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAAT-TGATAGACC 66340
||| || || || ||||| ||||||||| || ||||| ||||| || ||| | |||
Sbjct 1668900 ACACCGTTAGTGCCAGAGATGTAGCTTCCAGCAGCTCGAATGTTACTGATATGA-ACACC 1668958
Query 66341 TATTCCCCCTGCCATTTTAGAGATTAATGCGCA 66373
||||| |||| ||| ||||| | ||| ||
Sbjct 1668959 AATTCCTCCTGATGCTTTTGAGATCATTGCACA 1668991
Score = 107 bits (118), Expect = 3e-18
Identities = 346/536 (65%), Gaps = 6/536 (1%)
Strand=Plus/Minus
Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230
||||| || || | ||| ||||| || | ||||| | ||||| || || || || | |
Sbjct 870736 TGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTACCACCTTGGTCCACG 870677
Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290
|| | || ||||| || | || | | ||||||||| ||||| ||||| ||||| |||
Sbjct 870676 TAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGGAAGTACCGTTG 870617
Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCT 66350
|| |||| || || ||| | ||||| || || || | ||| ||||| ||
Sbjct 870616 GTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAACCGATTCCACCG 870557
Query 66351 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 66410
|| | || ||||| | || || | || || ||||| ||||| || || || ||
Sbjct 870556 GCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTTCGATGGAGTCC 870497
Query 66411 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 66470
||| ||||| || | || || |||||||| |||| ||| || || || ||
Sbjct 870496 TCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAGTACCGGCGTTGAAC 870437
Query 66471 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 66530
| || || ||||||||||| || | || || | || ||||| ||||| | ||
Sbjct 870436 AGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTAAGTCTCGAGGACT 870377
Query 66531 GAGTCTA---TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 66587
|| | | ||| | || | || | || || | ||| | |||||||||||||
Sbjct 870376 TTTTCAATGTTGTCCGA---GTGGACACCAATGGCAACTCTCATGATCATGTGCTGAGGT 870320
Query 66588 CTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 66647
|| || | | || || | | ||| | ||| || |||| || || || |||
Sbjct 870319 CTCTCGGCAACTTTACCGTCGACTCTCAGAAGGTAAGAACGCTCCAGGGTCTTGAATCCA 870260
Query 66648 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703
|| |||||||| ||||| || ||||| | || | ||||| || ||||||
Sbjct 870259 AAGTAGTTGTACTGGAAGTCGCGATCGTAGTTGATGGCGGAGTTCAGGACATCCTT 870204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172676592600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |