Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 >seq1 Length=2842153 Score = 111 bits (122), Expect = 2e-19 Identities = 374/573 (65%), Gaps = 22/573 (4%) Strand=Plus/Plus Query 65812 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 65871 |||| |||||||| || || | ||| || || ||| || |||||||| ||||| | Sbjct 1668430 ACTTAATGGTTCCCAAGTTCTTTTGGTTCGATTTCCGGTTGCATGCATCCTTGTAAAGCA 1668489 Query 65872 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC------GACTC 65925 ||||||||||||| || || |||| || | || |||| | ||| || | | | Sbjct 1668490 TGAATGGAGTACCTGTCTCTGTCTGCGAGTATAGAATCTTCTCCCACACTTTCCTGGCAC 1668549 Query 65926 GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGA 65985 || | | || || || | ||| | || ||||| | |||| | |||| Sbjct 1668550 GAACTGT----ATCCATCTGAAGTCCTTCTGCCT--CGTATTTTTGGTACAGTGCATCGA 1668603 Query 65986 ACTCGTCTCCCCAAACATTGTCCAATCCAGGA-CATT--CATCCGGACACATCAACGACC 66042 | || || || | |||| ||||||||| || | | |||| | ||| | | Sbjct 1668604 ATTCCTCCCCATACACATCAGACAATCCAGGTGCAGTATCTTCCGAAAACAGGCTC---C 1668660 Query 66043 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AAT 66101 | ||| ||| | | || || ||| || | ||||| ||||| ||||| ||| || Sbjct 1668661 AGTCTTGGTCGGCTTCAACACGACGCATGAACAAGTCAGGGATCCATAGAGC-ATAGAAC 1668719 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 | |||||||| || ||||| || || || || || | |||||||| | Sbjct 1668720 ATATCTCTGGCCCTCAAGTCCTCTTTACCATAGTTTTTCTTCATGTCGAGGAATTGTAAG 1668779 Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221 |||||| |||||| |||||||||||| || ||||||| | | |||| ||||| Sbjct 1668780 ATATCAGCATGCCATGGTTCCAAGTATGCACAGATGGCTCCAGGTCTTCTGTTGCCTCCT 1668839 Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281 ||||| | ||| |||| || |||| | |||| || ||| || |||||| || Sbjct 1668840 TGATCAACGTACTTAGCCGTTGTATTGAACACTCGCAGCATCGGTGCAATACCGCTGCTC 1668899 Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAAT-TGATAGACC 66340 ||| || || || ||||| ||||||||| || ||||| ||||| || ||| | ||| Sbjct 1668900 ACACCGTTAGTGCCAGAGATGTAGCTTCCAGCAGCTCGAATGTTACTGATATGA-ACACC 1668958 Query 66341 TATTCCCCCTGCCATTTTAGAGATTAATGCGCA 66373 ||||| |||| ||| ||||| | ||| || Sbjct 1668959 AATTCCTCCTGATGCTTTTGAGATCATTGCACA 1668991 Score = 107 bits (118), Expect = 3e-18 Identities = 346/536 (65%), Gaps = 6/536 (1%) Strand=Plus/Minus Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230 ||||| || || | ||| ||||| || | ||||| | ||||| || || || || | | Sbjct 870736 TGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTACCACCTTGGTCCACG 870677 Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290 || | || ||||| || | || | | ||||||||| ||||| ||||| ||||| ||| Sbjct 870676 TAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGGAAGTACCGTTG 870617 Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCT 66350 || |||| || || ||| | ||||| || || || | ||| ||||| || Sbjct 870616 GTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAACCGATTCCACCG 870557 Query 66351 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 66410 || | || ||||| | || || | || || ||||| ||||| || || || || Sbjct 870556 GCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTTCGATGGAGTCC 870497 Query 66411 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 66470 ||| ||||| || | || || |||||||| |||| ||| || || || || Sbjct 870496 TCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAGTACCGGCGTTGAAC 870437 Query 66471 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 66530 | || || ||||||||||| || | || || | || ||||| ||||| | || Sbjct 870436 AGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTAAGTCTCGAGGACT 870377 Query 66531 GAGTCTA---TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 66587 || | | ||| | || | || | || || | ||| | ||||||||||||| Sbjct 870376 TTTTCAATGTTGTCCGA---GTGGACACCAATGGCAACTCTCATGATCATGTGCTGAGGT 870320 Query 66588 CTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 66647 || || | | || || | | ||| | ||| || |||| || || || ||| Sbjct 870319 CTCTCGGCAACTTTACCGTCGACTCTCAGAAGGTAAGAACGCTCCAGGGTCTTGAATCCA 870260 Query 66648 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703 || |||||||| ||||| || ||||| | || | ||||| || |||||| Sbjct 870259 AAGTAGTTGTACTGGAAGTCGCGATCGTAGTTGATGGCGGAGTTCAGGACATCCTT 870204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172676592600