Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq4 100 3e-16 >seq4 Length=1514682 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| ||||| | ||||||||| ||||| ||||| |||||| | || || || || Sbjct 89385 AACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTTCTGCCATCCTC 89444 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 | ||| ||||| ||| |||| ||||||||||| || || || || ||||| || || Sbjct 89445 CAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCCTG 89504 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 ||| ||||| || | | || | ||||| | || ||| ||||| | || | ||||| Sbjct 89505 GATCTTTTGCTTGACGTTGTCAATGGTGTCTGAGGACTCAACCTCGAGTGTGATGGTCTT 89564 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || | || || ||||| || ||||| Sbjct 89565 ACCTGTGAGGGTCTTGACGAAGATCTGCAT 89594 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | ||||| || || || ||||| || || | || || || || Sbjct 88702 ACCAAGTGGAGTGTAGATTCCTTCTGGATGTTGTAGTCTGAAAGGGTTCTGCCATCCTCC 88761 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 | ||| ||||| || |||| ||||||||||| || || || || ||||| || || | Sbjct 88762 AACTGCTTACCGGCGAAGATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGG 88821 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || || | | || | ||||||| || |||||| |||| || | ||||| Sbjct 88822 ATCTTCTGCTTGACGTTATCGATGGTGTCGGAGGACTCCACTTCAAGAGTGATTGTCTTA 88881 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCATA 139765 || ||||| || || ||||| || |||||| Sbjct 88882 CCAGTCAAGGTCTTGACGAAGATCTGCATA 88911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063906988000