Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 1e-23
>seq1
Length=2842153
Score = 125 bits (138), Expect = 1e-23
Identities = 420/649 (65%), Gaps = 10/649 (2%)
Strand=Plus/Minus
Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998
|| || ||||| ||||| ||||||||||| || ||| || | || | || | |
Sbjct 870847 ACACGCTTCATGAAGAGGTCAGGAATCCACAGGGCTGGGAACAAGTCACGGGCACGGATC 870788
Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGAT--CGAGGAACGCCATAATATCAGAATGCCACG 80056
||||| || || || | |||| ||| || || | | || |||| ||||| |
Sbjct 870787 TCCTCCTTACC-GTGGT-TTTTACGGATGTCGGTGAGGTCGAAGATGTCAGCGTGCCATG 870730
Query 80057 GTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAG 80116
| || | ||| ||||| || | || |||| ||||| || || || || | ||| | |
Sbjct 870729 GCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTACCACCTTGGTCCACGTAACGGG 870670
Query 80117 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGG 80176
| ||||| || | || | | ||||||||| ||||| ||||| ||||| ||||| ||||
Sbjct 870669 CCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGGAAGTACCGTTGGTACCGG 870610
Query 80177 AGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTT 80236
|| || ||| ||||||| || || || | ||| ||||| || || | |
Sbjct 870609 CAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAACCGATTCCACCGGCGGTCT 870550
Query 80237 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCA 80296
| ||||| | || || | || || ||||| ||||| || || ||| || || |||
Sbjct 870549 TGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCCTTCA 870490
Query 80297 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 80356
|| || | || || |||||||| |||| ||| || || || || | || |
Sbjct 870489 TGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAGTACCGGCGTTGAACAGAGTTG 870430
Query 80357 GAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTA 80416
| ||||||||||| || | || |||| || ||||| ||||| | || ||| |
Sbjct 870429 GCGAAGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTAAGTCTCGAGGACTTTTTCAA 870370
Query 80417 ---TATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAA 80473
| ||| | || | || | || || | ||| | ||||||||||||||| ||
Sbjct 870369 TGTTGTCCGA---GTGGACACCAATGGCAACTCTCATGATCATGTGCTGAGGTCTCTCGG 870313
Query 80474 CGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGT 80533
| | || | | | ||| | |||||| |||| || || || ||||| ||||
Sbjct 870312 CAACTTTACCGTCGACTCTCAGAAGGTAAGAACGCTCCAGGGTCTTGAATCCAAAGTAGT 870253
Query 80534 TGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582
|||| ||||| || ||||| | || | ||||| || ||||||
Sbjct 870252 TGTACTGGAAGTCGCGATCGTAGTTGATGGCGGAGTTCAGGACATCCTT 870204
Score = 113 bits (124), Expect = 6e-20
Identities = 207/298 (69%), Gaps = 4/298 (1%)
Strand=Plus/Plus
Query 79957 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATT 80015
||||| ||||| ||||| ||| || | |||||||| || ||||| || || ||
Sbjct 1668696 TCAGGGATCCATAGAGC-ATAGAACATATCTCTGGCCCTCAAGTCCTCTTTACCATAGTT 1668754
Query 80016 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 80075
|| || | |||||||| | ||||||| |||||| |||||||||||| ||
Sbjct 1668755 TTTCTTCATGTCGAGGAATTGTAAGATATCAGCATGCCATGGTTCCAAGTATGCACAGAT 1668814
Query 80076 AACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 80135
|||| |||| | |||| ||||| ||||| | ||| |||| || |||| | ||||
Sbjct 1668815 GGCTCCAGGTCTTCTGTTGCCTCCTTGATCAACGTACTTAGCCGTTGTATTGAACACTCG 1668874
Query 80136 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGC 80195
|| ||| || |||||| || ||| || || || ||||| ||||||||| ||
Sbjct 1668875 CAGCATCGGTGCAATACCGCTGCTCACACCGTTAGTGCCAGAGATGTAGCTTCCAGCAGC 1668934
Query 80196 ACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 80252
||||| ||||| || ||| | ||| ||||| |||| ||| ||||| | ||| ||
Sbjct 1668935 TCGAATGTTACTGATATGA-ACACCAATTCCTCCTGATGCTTTTGAGATCATTGCACA 1668991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268665324600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |