Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq4 100 2e-16
>seq4
Length=1514682
Score = 100 bits (110), Expect = 2e-16
Identities = 162/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| | ||||| || ||||| ||| ||||| || || ||||||
Sbjct 89367 ACCACCTCTCAATCTGAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGG- 89425
Query 43954 TAATTGACGCT--CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGA 44011
|| | || |||| ||||| || || || ||||| || | ||||||||||| |
Sbjct 89426 -AAAGGGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGT 89484
Query 44012 GGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCC 44071
|| | |||||| ||||| || ||||| ||||| | ||| || |||| | |||
Sbjct 89485 GGGATACCTTCCTTATCCTGGATCTTTTGCTTGACGTTGTCAATGGTGTCTGAGGACTCA 89544
Query 44072 ACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
|| |||| || || || ||||| || | ||||| || || || ||||||
Sbjct 89545 ACCTCGAGTGTGATGGTCTTACCTGTGAGGGTCTTGACGAAGATCTGCATG 89595
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| | ||||| || || ||| ||||| ||||| || || ||
Sbjct 88911 ACCACCTCTCAATCTGAGAACCAAGTGGAGAGTGGATTCTTTCTGAATGTTGTAGTCAGA 88970
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
| || |||| ||||| || || || ||||| || | ||||||||||| | ||
Sbjct 88971 AAGGGTCCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGG 89030
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||| |||||| || || || ||||| | ||| || || | | || ||
Sbjct 89031 GATACCTTCCTTATCTTGGATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGATTCGAC 89090
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|||| ||| || || ||||| || | |||||| || || || |||||
Sbjct 89091 CTCGAGCGTGATAGTCTTACCAGTAAGAGTCTTGACGAAGATCTGCAT 89138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354777535142220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |