Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq4 125 2e-23
>seq4
Length=1514682
Score = 125 bits (138), Expect = 2e-23
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || || || | || | || |||||||||||||| || ||||||
Sbjct 88909 ATACCACCTCTCAATCTGAGAACCAAGTGGAGAGTGGATTCTTTCTGAATGTTGTAGTCA 88968
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || || || | || || || ||||| || || | || || || ||
Sbjct 88969 GAAAGGGTCCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGT 89028
Query 104450 GGTATTCCTTCTTTATCCTGAATCTT-TGCTTTTACATTTTCTACGGTATCGCTAGGTTC 104508
|| || ||||| ||||| || ||||| ||| || ||||| || | ||| || || |||
Sbjct 89029 GGGATACCTTCCTTATCTTGGATCTTCTGC-TTGACATTGTCAATGGTGTCCGAAGATTC 89087
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || ||||||||||||||||| || || || || ||||||||
Sbjct 89088 GACCTCGAGCGTGATAGTCTTACCAGTAAGAGTCTTGACGAAGATCTGCAT 89138
Score = 116 bits (128), Expect = 9e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || ||||| || | || | || || || ||||| || || |||||
Sbjct 89137 ATACCACCTCTGAGTCTAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCT 89196
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || ||||| |||||||| | || || |||||||| || || ||||| || || ||
Sbjct 89197 GAAAGGGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCTGGT 89256
Query 104450 GGTATTCCTTCTTTATCCTGAATCTT-TGCTTTTACATTTTCTACGGTATCGCTAGGTTC 104508
|| || || || |||||||| ||||| ||||| || || || | || ||| | ||
Sbjct 89257 GGAATGCCCTCCTTATCCTGGATCTTCTGCTTG-ACGTTATCGATAGTGTCGGAGGACTC 89315
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || || ||||||||||| | || || || || ||||||||
Sbjct 89316 CACTTCAAGAGTGATTGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 89366
Score = 111 bits (122), Expect = 4e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||| || ||||| || | || | ||||||||| ||||| || || ||||| ||
Sbjct 88684 CCGCCTCTAAGTCTAAGGACCAAGTGGAGTGTAGATTCCTTCTGGATGTTGTAGTCTGAA 88743
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
|| ||||| || || || | || || || || || || || | || || || || ||
Sbjct 88744 AGGGTTCTGCCATCCTCCAACTGCTTACCGGCGAAGATAAGACGTTGCTGGTCTGGTGGG 88803
Query 104453 ATTCCTTCTTTATCCTGAATCTT-TGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511
|| ||||| |||||||| ||||| ||||| || || || | ||| ||| | || ||
Sbjct 88804 ATACCTTCCTTATCCTGGATCTTCTGCTTG-ACGTTATCGATGGTGTCGGAGGACTCCAC 88862
Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || ||||||||||| | || || || || ||||||||
Sbjct 88863 TTCAAGAGTGATTGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 88910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398178715620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |