Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq4 111 1e-19
seq3 91.5 1e-13
>seq4
Length=1514682
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577
|| || || || ||| |||||| ||||||||||| |||| | || |||||||
Sbjct 1333637 ACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 1333578
Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637
|||||||||||| || | || | | |||||| || || | | |||||||||
Sbjct 1333577 AGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGG 1333518
Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697
|| |||||||||| | ||||| |||| ||||||| ||||| || ||||| |||
Sbjct 1333517 ATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTA 1333458
Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||||| || || || || |||||||||||
Sbjct 1333457 CCGGTCAGGGTCTTGACGAAAATCTGCAT 1333429
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | ||| || | || || || || || ||||||||| ||||||||||| |
Sbjct 89367 ACCACCTCTCAATCTGAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGGA 89426
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
| || | ||||||| |||||||||| | | || | ||| ||||| || ||
Sbjct 89427 AAGGGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGG 89486
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || |||||| ||| || || ||||||| | ||||| || | |||||
Sbjct 89487 GATACCTTCCTTATCCTGGATCTTTTGCTTGACGTTGTCAATGGTGTCTGAGGACTCAAC 89546
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||||| ||| ||||| ||||| ||||| || || || || ||||||||
Sbjct 89547 CTCGAGTGTGATGGTCTTACCTGTGAGGGTCTTGACGAAGATCTGCAT 89594
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | ||| || | || || || || ||| || || ||||||||||| ||||
Sbjct 88911 ACCACCTCTCAATCTGAGAACCAAGTGGAGAGTGGATTCTTTCTGAATGTTGTAGTCAG- 88969
Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617
|| || || | ||||||| |||||||||| | | || | ||| ||||| || |
Sbjct 88970 AAAGGGTCCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTG 89029
Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677
| | || |||||| || || |||||||||| | | ||||| || | ||| ||
Sbjct 89030 GGATACCTTCCTTATCTTGGATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGATTCGA 89089
Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||||| || || || ||||| || ||||| || || || ||||||||
Sbjct 89090 CCTCGAGCGTGATAGTCTTACCAGTAAGAGTCTTGACGAAGATCTGCAT 89138
>seq3
Length=1705961
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/197 (71%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGT 48593
|||||| || |||||||| || | || || || ||||||||| ||||||||| ||
Sbjct 1462821 CTCCTTCTGGATGTTGTAGTCCGA-AAGGGTACGGCCGTCCTCCAACTGCTTACCAGCGA 1462763
Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653
| || | | |||||| || || | | ||||||||| || ||||||||||
Sbjct 1462762 AGATAAGTCTCTGCTGGTCAGGTGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTGACGT 1462703
Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713
| ||||| |||| |||||| ||||| || || || || ||||| || ||||| |
Sbjct 1462702 TGTCAATGGTGTCGGAAGACTCAACCTCGAGGGTGATCGTCTTTCCGGTAAGGGTTTTAA 1462643
Query 48714 CAAAAATCTGCATCGTG 48730
| |||||||||||| ||
Sbjct 1462642 CGAAAATCTGCATCTTG 1462626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421251122990015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |