Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 105 1e-18 >seq2 Length=2777425 Score = 105 bits (116), Expect = 1e-18 Identities = 188/272 (69%), Gaps = 2/272 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||| | | |||| || ||||||||||||| || |||||||||||||||| Sbjct 322365 CGCTAAGCGTCACAGAAAGATC-CTGAGAGATAACATCCAGGGTATCACCAAGCCAGCTA 322307 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 || | | |||| | | ||||| ||||||||| |||||| | |||| || ||| Sbjct 322306 TCAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATCTCTGCCCTCATCTACGAGGAGG 322247 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 | | | ||| | ||| ||||| || |||| ||| || ||| || || || | Sbjct 322246 TCAGAGCCGTTCTCAAGTCGTTCCTTGAGTCCGTCATCAGAGACGCTGTCACGTACACTG 322187 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || | |||||||| || || | || | ||||| || | || | || | Sbjct 322186 AGCACGCCAAGAGAAAGACTGTTACTTCTCTCGACGTTGTCTACGCCCTCAAGAGACAGG 322127 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 | | | |||| ||||| || ||||| || Sbjct 322126 GAAGAACCCTTTACGGTTTCGGTGGTTAAACT 322095 Score = 104 bits (114), Expect = 4e-18 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||| | | ||| ||| ||||||||||||| || ||||| ||||| || | Sbjct 93409 CGCTAAGCGTCACAGAAAGAT-TCTCAGAGATAACATCCAGGGTATCACTAAGCCTGCCA 93351 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 || | | |||| | | ||||| ||||||||| |||||| | |||| || ||| Sbjct 93350 TCAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATCTCTGCCCTCATCTACGAGGAGG 93291 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 | | | ||| | ||| ||||| || |||| ||| || ||| || || |||| Sbjct 93290 TCAGAGCCGTTCTCAAGTCGTTCCTTGAGTCCGTCATCAGAGACGCTGTCACTTACACCG 93231 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 ||||||| || | |||||||| || || | ||| ||||||| || Sbjct 93230 AGCACGCCAAGAGAAAGACTGTTACTTCTCTCGATGTCGTCTACGC 93185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075186285395