Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2 105 1e-18
>seq2
Length=2777425
Score = 105 bits (116), Expect = 1e-18
Identities = 188/272 (69%), Gaps = 2/272 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| | | |||| || ||||||||||||| || ||||||||||||||||
Sbjct 322365 CGCTAAGCGTCACAGAAAGATC-CTGAGAGATAACATCCAGGGTATCACCAAGCCAGCTA 322307
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|| | | |||| | | ||||| ||||||||| |||||| | |||| || |||
Sbjct 322306 TCAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATCTCTGCCCTCATCTACGAGGAGG 322247
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
| | | ||| | ||| ||||| || |||| ||| || ||| || || || |
Sbjct 322246 TCAGAGCCGTTCTCAAGTCGTTCCTTGAGTCCGTCATCAGAGACGCTGTCACGTACACTG 322187
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || | |||||||| || || | || | ||||| || | || | || |
Sbjct 322186 AGCACGCCAAGAGAAAGACTGTTACTTCTCTCGACGTTGTCTACGCCCTCAAGAGACAGG 322127
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
| | | |||| ||||| || ||||| ||
Sbjct 322126 GAAGAACCCTTTACGGTTTCGGTGGTTAAACT 322095
Score = 104 bits (114), Expect = 4e-18
Identities = 160/226 (71%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| | | ||| ||| ||||||||||||| || ||||| ||||| || |
Sbjct 93409 CGCTAAGCGTCACAGAAAGAT-TCTCAGAGATAACATCCAGGGTATCACTAAGCCTGCCA 93351
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|| | | |||| | | ||||| ||||||||| |||||| | |||| || |||
Sbjct 93350 TCAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATCTCTGCCCTCATCTACGAGGAGG 93291
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
| | | ||| | ||| ||||| || |||| ||| || ||| || || ||||
Sbjct 93290 TCAGAGCCGTTCTCAAGTCGTTCCTTGAGTCCGTCATCAGAGACGCTGTCACTTACACCG 93231
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656
||||||| || | |||||||| || || | ||| ||||||| ||
Sbjct 93230 AGCACGCCAAGAGAAAGACTGTTACTTCTCTCGATGTCGTCTACGC 93185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075186285395
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |