Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 4e-22
>seq1
Length=2842153
Score = 120 bits (132), Expect = 4e-22
Identities = 377/573 (66%), Gaps = 22/573 (4%)
Strand=Plus/Plus
Query 62968 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63027
|||| || ||||| || || | ||| || || ||| || |||||||| ||||| |
Sbjct 1668430 ACTTAATGGTTCCCAAGTTCTTTTGGTTCGATTTCCGGTTGCATGCATCCTTGTAAAGCA 1668489
Query 63028 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC------GACTC 63081
||||||||||||| || || |||| || | || |||| | ||| || | | |
Sbjct 1668490 TGAATGGAGTACCTGTCTCTGTCTGCGAGTATAGAATCTTCTCCCACACTTTCCTGGCAC 1668549
Query 63082 GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGA 63141
|| | | || || || | ||||| || |||||| | |||| | ||||
Sbjct 1668550 GAACTGT----ATCCATCTGAAG-TCCTT-CTGCCTCGTATTTTTGGTACAGTGCATCGA 1668603
Query 63142 ACTCGTCTCCCCAAACATTGTCCAATCCAGGA-CATT--CATCCGGACACATCAACGACC 63198
| || || || | |||| ||||||||| || | | |||| | ||| | |
Sbjct 1668604 ATTCCTCCCCATACACATCAGACAATCCAGGTGCAGTATCTTCCGAAAACAGGCTC---C 1668660
Query 63199 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AAT 63257
| ||| ||| | | || || ||| || | ||||| ||||| ||||| ||| ||
Sbjct 1668661 AGTCTTGGTCGGCTTCAACACGACGCATGAACAAGTCAGGGATCCATAGAGC-ATAGAAC 1668719
Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317
| |||||||| || ||||| || || || || || | |||||||| |
Sbjct 1668720 ATATCTCTGGCCCTCAAGTCCTCTTTACCATAGTTTTTCTTCATGTCGAGGAATTGTAAG 1668779
Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377
||||||| |||||| |||||||||||| || ||||||| | | |||| |||||
Sbjct 1668780 ATATCAGCATGCCATGGTTCCAAGTATGCACAGATGGCTCCAGGTCTTCTGTTGCCTCCT 1668839
Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437
||||| | ||| |||| || |||| | |||| || ||| || ||||||| |
Sbjct 1668840 TGATCAACGTACTTAGCCGTTGTATTGAACACTCGCAGCATCGGTGCAATACCGCTGCTC 1668899
Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACC 63496
| ||| || || || ||||| ||||||||| || ||||| ||||| || ||| | |||
Sbjct 1668900 ACACCGTTAGTGCCAGAGATGTAGCTTCCAGCAGCTCGAATGTTACTGATATGA-ACACC 1668958
Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63529
||||| |||| ||| ||||| | ||| ||
Sbjct 1668959 AATTCCTCCTGATGCTTTTGAGATCATTGCACA 1668991
Score = 114 bits (126), Expect = 2e-20
Identities = 353/545 (65%), Gaps = 6/545 (1%)
Strand=Plus/Minus
Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377
|| |||| ||||| || || | ||| ||||| || | ||||| | ||||| || ||
Sbjct 870745 ATGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTACCACCT 870686
Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437
|| || | ||| | || ||||| || | || | | ||||||||| |||||||| ||
Sbjct 870685 TGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGGAA 870626
Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63497
|||| |||||||||| || || ||| ||||||| || || || | |||
Sbjct 870625 GTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAACCG 870566
Query 63498 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCT 63557
||||| || || | || ||||| | || || | || || || || |||||||| ||
Sbjct 870565 ATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTTCG 870506
Query 63558 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 63617
||| || || ||||| || | || || |||||||| |||| ||| ||
Sbjct 870505 ATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAGTACCG 870446
Query 63618 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63677
|| || || | || || ||||||||||| || | || || | || ||||| |||
Sbjct 870445 GCGTTGAACAGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTAAGTC 870386
Query 63678 TCAATAGCTGAGTCTA---TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734
|| | || || | | ||| | || | || | || || | ||| | ||||
Sbjct 870385 TCGAGGACTTTTTCAATGTTGTCCGA---GTGGACACCAATGGCAACTCTCATGATCATG 870329
Query 63735 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794
||||||||||| || | | || || | | ||| | ||| || |||| ||
Sbjct 870328 TGCTGAGGTCTCTCGGCAACTTTACCGTCGACTCTCAGAAGGTAAGAACGCTCCAGGGTC 870269
Query 63795 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63854
|| || ||||| |||||||| ||||| || ||||| | || | ||||| || |
Sbjct 870268 TTGAATCCAAAGTAGTTGTACTGGAAGTCGCGATCGTAGTTGATGGCGGAGTTCAGGACA 870209
Query 63855 TCCTT 63859
|||||
Sbjct 870208 TCCTT 870204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947083197400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |