Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1 221 3e-52
>seq1
Length=2842153
Score = 221 bits (244), Expect = 3e-52
Identities = 522/780 (67%), Gaps = 14/780 (2%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||||||||| ||||||| ||| ||| || || |||| ||| || ||||| |||
Sbjct 870414 TTCACGCACGCTTCGCCAACTCTGTTCAACGCCGGTACTCCACGTCCTCAAATGTCGTCT 870473
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| | | |||||||| || |||||||| ||||||| || || | ||| |
Sbjct 870474 TGCTTCTTGGTTGCCATGAAGGAGGACTCCATCGAAGGTATCTACGATACTTTGAAGCAG 870533
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-C 363725
|||||||| || ||||||| || || ||||| ||| | |||||||| | |||| |
Sbjct 870534 TGTGCTCTCATCTCCAAGACCGCCGGTGGAATCGGTTTGCACATCCACAACATCCGTGCC 870593
Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTC 363784
|| | | ||||||| ||| || || ||| || || || | |||| ||| | |
Sbjct 870594 ACTG-GCTCTTACATTGCCGGTACCAACGG-TACTTCCAACGGTATCATTCCAATGGTCC 870651
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
|||| || |||| || || | ||||| ||||| ||||| ||| | || ||
Sbjct 870652 GTGTCTTCAACAACACGGCCCGTTACGTGGACCAAGGTGGTAACAAGAGACCTGGTGCCA 870711
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
| || || || |||||||| || || || || || || | || |||| ||||
Sbjct 870712 TCGCCATCTACCTCGAGCCATGGCACGCTGACATCTTCGACCTCACCGACATCCGTAAAA 870771
Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
|| || || ||||| | ||||| ||||| ||||| || || ||| || ||||||
Sbjct 870772 ACCACGGTAAGGAGGAGATCCGTGCCCGTGACTTGTTCCCAGCCCTGTGGATTCCTGACC 870831
Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTC 364024
|| |||||||| || ||||| | ||| | ||||| | ||| || |
Sbjct 870832 TCTTCATGAAGCGTGTCGAGGCCAACTCCACGTGGACTCTCTTCTCTCCATCGGAGGCCC 870891
Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG 364084
|||||||||||||||| | || ||||| | | ||| ||||| | || || |
Sbjct 870892 CAGGTCTTTCCGATGTCTACGGAGACGAGTTCGAACGTCTCTACGAGAGATACGAGCGCG 870951
Query 364085 AGGGAAAGGCTCGTAAG----ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGAT 364140
||||| | | ||| || || || |||||||| |||| |||| ||||
Sbjct 870952 AGGGA----CGTGGAAGACGTACCATCAAGGCCCAGAAGCTGTGGTACCACATCTTGGAG 871007
Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCC 364200
| |||| ||||| || || || | ||| | ||||| || | |||||||||||||||
Sbjct 871008 GCCCAGACCGAGACTGGTACTCCATTCATGGTCTACAAGGACGCTTGCAACCGCAAGTCC 871067
Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATAC 364260
||||||||| |||| ||||| || || |||| | || ||| || |||| |||
Sbjct 871068 AACCAGCAGAACCTGGGTACCATCAAGTCTTCCAACTTGTGCTGTGAGGTTGTTGAGTAC 871127
Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTT-CCGGCGTTTGT 364319
|| |||| || || |||||| |||||| | || || || |||| || || |||||
Sbjct 871128 TCCTCTCCAGAGGAAGTTGCCGTCTGTAACTTGGCTTCCGTC-TGCTTGCCAGCCTTTGT 871186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353349511730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |