Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 221 3e-52 >seq1 Length=2842153 Score = 221 bits (244), Expect = 3e-52 Identities = 522/780 (67%), Gaps = 14/780 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||||||||| ||||||| ||| ||| || || |||| ||| || ||||| ||| Sbjct 870414 TTCACGCACGCTTCGCCAACTCTGTTCAACGCCGGTACTCCACGTCCTCAAATGTCGTCT 870473 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| | | |||||||| || |||||||| ||||||| || || | ||| | Sbjct 870474 TGCTTCTTGGTTGCCATGAAGGAGGACTCCATCGAAGGTATCTACGATACTTTGAAGCAG 870533 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-C 363725 |||||||| || ||||||| || || ||||| ||| | |||||||| | |||| | Sbjct 870534 TGTGCTCTCATCTCCAAGACCGCCGGTGGAATCGGTTTGCACATCCACAACATCCGTGCC 870593 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTC 363784 || | | ||||||| ||| || || ||| || || || | |||| ||| | | Sbjct 870594 ACTG-GCTCTTACATTGCCGGTACCAACGG-TACTTCCAACGGTATCATTCCAATGGTCC 870651 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 |||| || |||| || || | ||||| ||||| ||||| ||| | || || Sbjct 870652 GTGTCTTCAACAACACGGCCCGTTACGTGGACCAAGGTGGTAACAAGAGACCTGGTGCCA 870711 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 | || || || |||||||| || || || || || || | || |||| |||| Sbjct 870712 TCGCCATCTACCTCGAGCCATGGCACGCTGACATCTTCGACCTCACCGACATCCGTAAAA 870771 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || || ||||| | ||||| ||||| ||||| || || ||| || |||||| Sbjct 870772 ACCACGGTAAGGAGGAGATCCGTGCCCGTGACTTGTTCCCAGCCCTGTGGATTCCTGACC 870831 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTC 364024 || |||||||| || ||||| | ||| | ||||| | ||| || | Sbjct 870832 TCTTCATGAAGCGTGTCGAGGCCAACTCCACGTGGACTCTCTTCTCTCCATCGGAGGCCC 870891 Query 364025 CAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG 364084 |||||||||||||||| | || ||||| | | ||| ||||| | || || | Sbjct 870892 CAGGTCTTTCCGATGTCTACGGAGACGAGTTCGAACGTCTCTACGAGAGATACGAGCGCG 870951 Query 364085 AGGGAAAGGCTCGTAAG----ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGAT 364140 ||||| | | ||| || || || |||||||| |||| |||| |||| Sbjct 870952 AGGGA----CGTGGAAGACGTACCATCAAGGCCCAGAAGCTGTGGTACCACATCTTGGAG 871007 Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCC 364200 | |||| ||||| || || || | ||| | ||||| || | ||||||||||||||| Sbjct 871008 GCCCAGACCGAGACTGGTACTCCATTCATGGTCTACAAGGACGCTTGCAACCGCAAGTCC 871067 Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATAC 364260 ||||||||| |||| ||||| || || |||| | || ||| || |||| ||| Sbjct 871068 AACCAGCAGAACCTGGGTACCATCAAGTCTTCCAACTTGTGCTGTGAGGTTGTTGAGTAC 871127 Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTT-CCGGCGTTTGT 364319 || |||| || || |||||| |||||| | || || || |||| || || ||||| Sbjct 871128 TCCTCTCCAGAGGAAGTTGCCGTCTGTAACTTGGCTTCCGTC-TGCTTGCCAGCCTTTGT 871186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353349511730