Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq4 132 5e-26
seq3 131 2e-25
seq1 84.2 2e-11
>seq4
Length=1514682
Score = 132 bits (146), Expect = 5e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082
|| || || || | ||| |||||||| ||||||||||| || | || | ||||
Sbjct 1333640 AGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTGCCGTCC 1333581
Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142
|| |||||||| || ||| |||| | | ||||||||| ||||| ||||| || |||||
Sbjct 1333580 TCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCC 1333521
Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202
||| |||||||||| | || | || |||| ||||| | |||| ||| | |||
Sbjct 1333520 TGGATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 1333461
Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||||||| || || || |||||||||||||||
Sbjct 1333460 TTACCGGTCAGGGTCTTGACGAAAATCTGCATG 1333428
Score = 122 bits (134), Expect = 8e-23
Identities = 169/234 (72%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | ||| | || || || || | || ||||||||||| ||||||||||||
Sbjct 89368 CCACCTCTCAATCTGAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGGAA 89427
Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| | || | ||||| | |||||| || || |||| | ||| |||||||| || ||
Sbjct 89428 AGGGTTCTGCCA-TCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGG 89486
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| ||||| || || ||| || ||||||| | || | || || | |||||| |
Sbjct 89487 GATACCTTCCTTATCCTGGATCTTTTGCTTGACGTTGTCAATGGTGTCTGAGGACTCAAC 89546
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACTTA 131240
|||| || | ||| ||||| || || || || ||||| |||||||||| |||
Sbjct 89547 CTCGAGTGTGATGGTCTTACCTGTGAGGGTCTTGACGAAGATCTGCATGATTTA 89600
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | ||| | || || || || | || || || || ||||||||||| ||
Sbjct 88912 CCACCTCTCAATCTGAGAACCAAGTGGAGAGTGGATTCTTTCTGAATGTTGTAGTCAGAA 88971
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| | |||||| || || |||| | ||| |||||||| || |||
Sbjct 88972 AGGGTCCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGG 89031
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || ||| |||||||||| | || | || || | || ||||
Sbjct 89032 ATACCTTCCTTATCTTGGATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGATTCGACC 89091
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | || ||||| || ||||| || ||||| ||||||||
Sbjct 89092 TCGAGCGTGATAGTCTTACCAGTAAGAGTCTTGACGAAGATCTGCAT 89138
>seq3
Length=1705961
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | || | ||| || || || | ||||||||||| || |||||||| ||
Sbjct 1462856 CCACCTCTCAGTCTCAGAACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1462797
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| | |||||| || ||| |||| | | ||||||||| || |||
Sbjct 1462796 AGGGTACGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCAGGTGGG 1462737
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || ||||| ||| |||||||||| | || | || |||| ||||| |
Sbjct 1462736 ATTCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCAACC 1462677
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | || || ||||| || ||||| ||||||||||||||
Sbjct 1462676 TCGAGGGTGATCGTCTTTCCGGTAAGGGTTTTAACGAAAATCTGCAT 1462630
>seq1
Length=2842153
Score = 84.2 bits (92), Expect = 2e-11
Identities = 154/226 (68%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||| ||| ||||| ||||| | ||| | |||| | || | ||| || ||| | ||
Sbjct 871750 TTGACGATCTGGAACTCACCGGCGAGCACTCTACGCGAGTAGATGTTGGAAGTGTATGGC 871691
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| | |||| ||| || | ||| | || || ||||| ||||||
Sbjct 871690 TCGAAGCACTCGTTGTAACCCATGATCTGGGAGGTGGAAGCAGTTGGCATTGGAGCCACC 871631
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
|| | || || | || ||| ||| ||| | |||| | | | |||| |||||
Sbjct 871630 AAGAGCGAGTTTCTAAGTCCGGTCTTGGCGATCTTAGCCTTCAACTCATCCCAGTCCCAC 871571
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT 145283
|| || ||| || | |||||| ||||||||||| || ||||
Sbjct 871570 AGATCGGTTGGCTTCTTGCCCCACAGATCGTACTGCAAGATACCCT 871525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012711497600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |