Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq8 122 6e-23
seq7 122 6e-23
seq4 100 2e-16
>seq8
Length=5675
Score = 122 bits (134), Expect = 6e-23
Identities = 84/95 (88%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||| ||||||||||||||| |||||||||||||||||| ||||| || |||||| |
Sbjct 4859 AAGTCCGTTCCCTTGGCTGCGGTTTCGCTAGATAGTAGGTAGGGACAGTGGGAATCTCAT 4800
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 4799 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 4765
Score = 93.3 bits (102), Expect = 3e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||| ||||||| |||||| |||| ||||||||| |||||||||||| |
Sbjct 3005 CTCTCTTTTCAAAGTGCTTTTCATCTTTCCATCACTGTACTTGTTTGCTATCGGTCTCTC 2946
Query 20007 GGTAATATTTAGCC 20020
| | ||||||||||
Sbjct 2945 GCTGATATTTAGCC 2932
>seq7
Length=6709
Score = 122 bits (134), Expect = 6e-23
Identities = 84/95 (88%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||| ||||||||||||||| |||||||||||||||||| ||||| || |||||| |
Sbjct 1519 AAGTCCGTTCCCTTGGCTGCGGTTTCGCTAGATAGTAGGTAGGGACAGTGGGAATCTCAT 1578
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 1579 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1613
Score = 93.3 bits (102), Expect = 3e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||| ||||||| |||||| |||| ||||||||| |||||||||||| |
Sbjct 3373 CTCTCTTTTCAAAGTGCTTTTCATCTTTCCATCACTGTACTTGTTTGCTATCGGTCTCTC 3432
Query 20007 GGTAATATTTAGCC 20020
| | ||||||||||
Sbjct 3433 GCTGATATTTAGCC 3446
>seq4
Length=1514682
Score = 100 bits (110), Expect = 2e-16
Identities = 163/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||||||| | | ||||| || || || ||||||||| || |||||||| |
Sbjct 89366 TACCACCTCTCAATCTGAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGG 89425
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | | | || || || || || |||||||| || || ||||| || || | |
Sbjct 89426 AAAGGGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTG 89485
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| || ||| || |||||||| || || | | || ||| ||||
Sbjct 89486 GGATACCTTCCTTATCCTGGATCTTTTGCTTGACGTTGTCAATGGTGTCTGAGGACTCAA 89545
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTTA 38323
| || | ||| || || ||||| || | ||| || ||||| ||||||||| ||||
Sbjct 89546 CCTCGAGTGTGATGGTCTTACCTGTGAGGGTCTTGACGAAGATCTGCATGATTTA 89600
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||||||| | | ||||| || |||||| || || ||||| ||||| ||||
Sbjct 88910 TACCACCTCTCAATCTGAGAACCAAGTGGAGAGTGGATTCTTTCTGAATGTTGTAGTCAG 88969
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | || | || || || || || |||||||| || || ||||| || || | |
Sbjct 88970 AAAGGGTCCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTG 89029
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| || || || || ||||| ||||| | | || || | ||| |
Sbjct 89030 GGATACCTTCCTTATCTTGGATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGATTCGA 89089
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | || ||||| ||||| || | || || ||||| ||||||||
Sbjct 89090 CCTCGAGCGTGATAGTCTTACCAGTAAGAGTCTTGACGAAGATCTGCAT 89138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334947138767465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |