Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq4 194 3e-44
seq3 89.7 9e-13
>seq4
Length=1514682
Score = 194 bits (214), Expect = 3e-44
Identities = 170/212 (80%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| ||||| ||||| ||||||||||| |||||||| || || || ||||| ||
Sbjct 89386 ACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTTCTGCCATCCTCC 89445
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|||||||| ||||| || || || | ||| ||||| ||||| || |||||||| || ||
Sbjct 89446 AACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGG 89505
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|||||| ||||||| || |||||||||| || || || || | |||||||| ||
Sbjct 89506 ATCTTTTGCTTGACGTTGTCAATGGTGTCTGAGGACTCAACCTCGAGTGTGATGGTCTTA 89565
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464
|| ||||||||||||||||| |||||||| ||
Sbjct 89566 CCTGTGAGGGTCTTGACGAAGATCTGCATGAT 89597
Score = 165 bits (182), Expect = 2e-35
Identities = 162/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || |||||||| || |||||||| || || || || || || || |||||
Sbjct 89158 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAAAGGGTTCTGCCGTCTTCC 89217
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|||||||| || || || || ||||| || ||||| ||||||||||| ||||| || ||
Sbjct 89218 AACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCCTGG 89277
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||||| ||||| ||||| | || || ||||| | ||||| || ||
Sbjct 89278 ATCTTCTGCTTGACGTTATCGATAGTGTCGGAGGACTCCACTTCAAGAGTGATTGTCTTA 89337
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | |||||||||||| ||||||||
Sbjct 89338 CCAGTCAAGGTCTTGACGAAGATCTGCAT 89366
Score = 165 bits (182), Expect = 2e-35
Identities = 162/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || |||||||| || || ||||| || || || || || || || || ||
Sbjct 1333637 ACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 1333578
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| |||||||| || ||||| || ||||| || ||||| || |||||||| ||
Sbjct 1333577 AGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGG 1333518
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||||| || |||||||| | || || || || | ||||||||| ||
Sbjct 1333517 ATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTA 1333458
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||||||||||||| ||||||||
Sbjct 1333457 CCGGTCAGGGTCTTGACGAAAATCTGCAT 1333429
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || || || || || |||||||| || || || || || || ||||| ||
Sbjct 88702 ACCAAGTGGAGTGTAGATTCCTTCTGGATGTTGTAGTCTGAAAGGGTTCTGCCATCCTCC 88761
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|||||||| |||||||| || || | ||| ||||| ||||| || |||||||| || ||
Sbjct 88762 AACTGCTTACCGGCGAAGATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGG 88821
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||||| ||||||||||| | || || ||||| | ||||| || ||
Sbjct 88822 ATCTTCTGCTTGACGTTATCGATGGTGTCGGAGGACTCCACTTCAAGAGTGATTGTCTTA 88881
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | |||||||||||| ||||||||
Sbjct 88882 CCAGTCAAGGTCTTGACGAAGATCTGCAT 88910
Score = 156 bits (172), Expect = 8e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||| ||||| || ||||| || || || || |||| ||||| ||
Sbjct 88930 ACCAAGTGGAGAGTGGATTCTTTCTGAATGTTGTAGTCAGAAAGGGTCCGGCCATCCTCC 88989
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
|||||||| ||||| || || || | ||| ||||| ||||| || |||||||| |||||
Sbjct 88990 AACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCTTGG 89049
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| |||||| || |||||||| | ||||| || || | ||||| || ||
Sbjct 89050 ATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGATTCGACCTCGAGCGTGATAGTCTTA 89109
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || ||||||||||| ||||||||
Sbjct 89110 CCAGTAAGAGTCTTGACGAAGATCTGCAT 89138
>seq3
Length=1705961
Score = 89.7 bits (98), Expect = 9e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225815 TCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCG 225874
|| ||||| ||||| | |||||| || |||| || | |||||| ||| || ||
Sbjct 471853 TCTGGGAATCCCTCGACCTGGCCGTTGGCAAGTGCCTTCAAAAGGGTAGACTTACCAGCA 471794
Query 225875 CCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTC 225934
||||| |||||| ||| ||||| || ||||||| |||| | || |||
Sbjct 471793 CCGTTAGGACCGCAGAGACCGTATCTGGAACCACGCTTGAGTCTGAGCTGAGTCTTGTTG 471734
Query 225935 AGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTC 225993
|| | ||||| |||| ||||||||||||||||| || | ||| ||||||||||| ||
Sbjct 471733 AGCAAAATCTTAGCACCGTAGGCAAGGGAGAACTCACAGTTGCAGAGGTCCTCACCTTC 471675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622227195800
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