Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 7e-17
seq4 98.7 8e-16
>seq3
Length=1705961
Score = 102 bits (112), Expect = 7e-17
Identities = 162/232 (70%), Gaps = 3/232 (1%)
Strand=Plus/Minus
Query 114154 TACCGCCACGT---AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210
|||| |||| | ||||||| ||| || || | || || || || || |||||||| |
Sbjct 1462861 TACCACCACCTCTCAGTCTCAGAACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAGT 1462802
Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270
| | ||||| || || | || ||||||||| |||| || | ||| ||||| |
Sbjct 1462801 CCGAAAGGGTACGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCAG 1462742
Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330
| || || || || ||||| ||||| || || | | |||| |||||||| || |
Sbjct 1462741 GTGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACT 1462682
Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| || || | ||| | ||| || ||||| || ||||| || |||||||||||
Sbjct 1462681 CAACCTCGAGGGTGATCGTCTTTCCGGTAAGGGTTTTAACGAAAATCTGCAT 1462630
>seq4
Length=1514682
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224
||||| | || || || | || || || || ||||||||||| || | ||| |
Sbjct 1333646 AGTCTAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTG 1333587
Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284
|| || || || ||||| ||| |||| || | ||| ||||| |||||||| || ||
Sbjct 1333586 CCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAGGAATTCCCTCC 1333527
Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344
||||| ||||| || || | | |||| |||||||| || || || || | |||
Sbjct 1333526 TTGTCCTGGATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTG 1333467
Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
| || || |||||||| || || || ||||||||||||
Sbjct 1333466 ATGGTCTTACCGGTCAGGGTCTTGACGAAAATCTGCATG 1333428
Score = 96.9 bits (106), Expect = 3e-15
Identities = 164/238 (69%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | ||| | ||| || || | |||||| || ||||| ||||||||||||
Sbjct 89365 ATACCACCTCTCAATCTGAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCG 89424
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || | ||| || | || ||||| || |||| ||||| || ||||| ||
Sbjct 89425 GAAAGGGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGT 89484
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| || || |||||||| || | | |||| |||||| | ||| ||
Sbjct 89485 GGGATACCTTCCTTATCCTGGATCTTTTGCTTGACGTTGTCAATGGTGTCTGAGGACTCA 89544
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAAT 114390
|| || | || | || || || || || || || || || ||||||||| |||||
Sbjct 89545 ACCTCGAGTGTGATGGTCTTACCTGTGAGGGTCTTGACGAAGATCTGCATGATTTAAT 89602
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | ||| | ||| || || | || |||||||| ||||||||||| ||
Sbjct 88909 ATACCACCTCTCAATCTGAGAACCAAGTGGAGAGTGGATTCTTTCTGAATGTTGTAGTCA 88968
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || ||| || | || ||||| || |||| ||||| || ||||| ||
Sbjct 88969 GAAAGGGTCCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGT 89028
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| || || ||||| || || | | |||| |||||| | ||||||
Sbjct 89029 GGGATACCTTCCTTATCTTGGATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGATTCG 89088
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || || || || ||||| || || || ||||||||
Sbjct 89089 ACCTCGAGCGTGATAGTCTTACCAGTAAGAGTCTTGACGAAGATCTGCAT 89138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134323194180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |