Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4 268 2e-66 seq1 232 1e-55 >seq4 Length=1514682 Score = 268 bits (296), Expect = 2e-66 Identities = 586/861 (68%), Gaps = 24/861 (3%) Strand=Plus/Minus Query 42297 GACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGAC 42356 ||||||||| |||||||||||||| || ||| ||||||| |||||||||| ||| Sbjct 729270 GACATCTGGGAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCACCGAGGAGATCGAC 729211 Query 42357 CTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAG----AACGAAAAGTTTTTCCT 42412 || | ||||| | || |||| | | || ||| ||||| | | ||| | Sbjct 729210 TTGTCTAAGGATCTGATCGACTGGAACACCAAGT-TGAACGCCAACGAGAGATACTTCAT 729152 Query 42413 CAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTG-GCCA 42471 | | || || ||||||||||| || ||||| || ||| | |||||| || |||| Sbjct 729151 CTCGCGTGTGCTCGCATTCTTCGCCGCTTCCGACGGTATCGTCGACGAGAACTTGTGCCA 729092 Query 42472 CCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAG 42531 | |||| | ||||| ||| ||||| || |||||||||||||||||| Sbjct 729091 GAAC-TTCACTACTGAGGTTCAGATGCCAGAGGCCCGTGCCTTCTACGGCTTCCAGATCA 729033 Query 42532 CCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATC 42591 | |||||| | ||||| ||| ||| || ||| || |||| |||||| || Sbjct 729032 TGGTGGAGAACATCCACTCCGAGACTTACTCCGTGCTGATCGACACCTACATCACCGACA 728973 Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651 |||| ||| |||| ||||||| |||| || || |||||| |||||| Sbjct 728972 AAAGCGAGGCCAACTACTTGTTTGAGGCCATCGAGAACATCCCACCTATCAAGGAGAAGG 728913 Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAG 42711 | |||||| ||| ||||| |||| ||||| | || ||| | ||| | | Sbjct 728912 CCCTCTGGGCCGTCAGATGGATGGAGAACAAGGACGCCCTTTACGCTGAGCGTCTGATCG 728853 Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771 ||| | ||| |||| || ||||||||||| || | ||||| || ||||||||||||| Sbjct 728852 CCTACGCTGCCATCGAAGGTATCTTCTTCTCAGGATCGTTCGCTTCGATCTTCTGGCTCA 728793 Query 42772 AGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830 || ||| |||| || ||||| || ||||||||||| ||||| |||||| |||| || ||| Sbjct 728792 AGAAGAGAGGTCTC-ATGCCAGGTCTCACCTTCTCCAACGAGCTCATCTGCAGAGATGAG 728734 Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTC- 42889 || |||| | ||||| |||||| | || |||||| |||||| |||| | ||| Sbjct 728733 GGCTTGCACACCGACTTCGCCTGCTTACTCTTCTCG---CACCTC---GACAA-CACTCC 728681 Query 42890 -GAAGGAGC--GGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCT 42946 || ||| ||| |||||||| ||||| || || ||||||||| ||| Sbjct 728680 AGACCCAGCCATCGTCACCAGAATCATCACCGAGGCTGTCGATATCGAGAAGTCCTTCTG 728621 Query 42947 CACGCAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACA 43005 | | | | || || || || || |||| |||||| ||||||||||||| ||||| Sbjct 728620 GAAGGA-TGCCTTACCATGTTCTTTGCTCGGTATGAACTGCGACCTCATGTGCCAGTACG 728562 Query 43006 TCCAGTACGTCGCCGAC-CATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACG 43064 || ||| | || ||| || | | | | ||| | || | | |||||| Sbjct 728561 TCGAGTTCTGTGCTGACAGATTGCTCGCTTCCGTTGGTTGCAAGAAG-GTGTACAACGTT 728503 Query 43065 CCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAG 43124 | ||| |||||||| |||||||||||||| | | || ||||| ||||| |||||| Sbjct 728502 ACAAACCCATTCGACTTCATGGAGAACATCTCCCTCGCTGGTAAGACTAACTTCTTCGAG 728443 Query 43125 AAGCGCGTCGCCGACTACCAG 43145 ||||| ||| ||||||||||| Sbjct 728442 AAGCGTGTCTCCGACTACCAG 728422 >seq1 Length=2842153 Score = 232 bits (256), Expect = 1e-55 Identities = 1181/1864 (63%), Gaps = 39/1864 (2%) Strand=Plus/Minus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| || || |||| |||| ||| | |||||||||||| || ||||| || | Sbjct 872088 TGAACTGGATGGCGGCAGCGGCAGCCTGGGTACGCAGGTAGTACATACCAGTCTTAAGGC 872029 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | | ||| | | || |||||| | || | ||| ||| | || | | | | Sbjct 872028 CCTTCTTCCAACCATAGAAGTGCATCGAGGTGATCTTACCCAT-----GGTTGGAGACTT 871974 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 || || ||| | |||| | |||||| ||| ||| | | || |||| Sbjct 871973 G-------AGGTGGATGTTCATCGACTCGGACTGGTCAACGTAGGCACCTCTGTCGGCGG 871921 Query 243921 CCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT 243980 ||||| ||||| |||| || || ||||| || | ||||||||||| |||||| | Sbjct 871920 CCATGTCGATGATTCCCTTTTGGGAGATCTCCCACACGGTCTTGTAGATCTTCTTGAGTT 871861 Query 243981 GCTCGGGGAACCCTTCGATGTT-CTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039 || || ||| | || | | ||| | ||| || || | ||||| | | | | Sbjct 871860 CGTCTGG-AACGTTAGGAAGGTGCTGGATCGAACCGTTATCACTGATGATGTAGTTCTTC 871802 Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACC 244099 || ||||| ||| | || | | ||| | || || || ||| || | | Sbjct 871801 ATAGCATCGTCCCAGATTCCAAGGTCGACCAAGTCACGGAGCATGTAAGGGTTGACGATC 871742 Query 244100 TGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTC 244159 || ||||| || | ||||| | ||| ||||| |||| || ||||||| || | Sbjct 871741 TGGAACTCACCGGCGAGCACTCTACGCGAGTAGATGTTGGAAGTGTATGGCTCGAAGCAC 871682 Query 244160 TCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTG 244219 || ||| |||| ||||| | ||| ||||| ||||| || | ||||| || | Sbjct 871681 TCGTTGTAACCCATGATCTGGGAGGTGGAAGCAGTTGGCATTGGAGCCACCAAGAGCGAG 871622 Query 244220 TTCCTCACGCCGTGCCTCTGGATGCGGAGTCTG-AGCTCGTTCCAGTCCCACATGCCCGA 244278 || || | ||| | | ||| | || || | ||| | ||||||||||| || Sbjct 871621 TTTCTAAGTCCGGTCTTGGCGAT-CTTAGCCTTCAACTCATCCCAGTCCCACA-----GA 871568 Query 244279 GAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCT 244338 ||| | || | | |||||||| || |||||| | |||||| | | || Sbjct 871567 TCGGT--TGGCTTCTT--GCCCCACAGATCGTACTGCAAGATACCCTTGGAGGCTGGCGA 871512 Query 244339 GCCCTCGTAGGTCGGGTAGGGACCGTCG-CGCTGGGCCAGCTTACAGCTCTCGTCGAGGG 244397 ||||||||||||| ||| ||| || || ||| ||| || | | || | | Sbjct 871511 GCCCTCGTAGGTCTCGTACACACCTTCCTCGGTGG-CCAACTCGGACGAAGCCTCCAAAG 871453 Query 244398 CGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGA 244457 | |||| ||||||||||||||||||| | |||| || ||||||| | || || Sbjct 871452 CTGCGTGGTAGATGGTCTCGAAGATCTGGATATTCAACTCACGGGCCTCTGGGGAGTCGA 871393 Query 244458 AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTC 244517 | || | | || | ||| |||||||| || ||||| |||| | | |||| Sbjct 871392 ATGGCAGACGGCACAGGAAGAAAGTGTCGGCCAAACCTTGCACACCGAGAGCAACAGGTC 871333 Query 244518 TGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCT 244577 ||| || | |||| || || || || || || ||||| |||| | ||| || || Sbjct 871332 TGTTTCTCATGTTAGAACGGCGAGCCTCTGGAACTGGGTAGTAGTTCCGGTCAATGACAC 871273 Query 244578 TGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGT 244637 ||| | ||| || || | | || || | | || | || ||||| ||| | Sbjct 871272 AGTTCAAGTTACGAGTAAGAACCTTGATGATCTGGTGCAACTTCTCAAAGTTGTAAGAGG 871213 Query 244638 AGGGATCCTCGGCGATGGTGATCCTC-ACAAACTCGTTGAGGGCGACGCTGGCCAGGTTG 244696 | | | | |||| || | | ||| ||||| | | | |||| |||| ||| Sbjct 871212 AAGATTTGTTGGCGTTG-TCCTGCTCGACAAAGGCTGGCAAGCAGACGGAAGCCAAGTTA 871154 Query 244697 CAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCAC 244756 |||||||| || ||||| | || ||||| |||| ||| ||| | ||| || Sbjct 871153 CAGACGGCAACTTCCTCTGGAGAGGAGTACTCAACAACCTCACAGCACAAGTTGGAAGAC 871094 Query 244757 TTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATG 244816 |||||||| ||||||| ||| || ||||||||| |||||| ||||||||||||| |||| Sbjct 871093 TTGATGGTACCCAGGTTCTGCTGGTTGGACTTGCGGTTGCAAGCGTCCTTGTAGACCATG 871034 Query 244817 AAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTG 244876 || || || |||||| |||||| | | || | || ||| || | | |||||| Sbjct 871033 AATGGAGTACCAGTCTCGGTCTGGGCCTCCAAGATGTGGTACCACAGCTTCTGGGCCTTG 870974 Query 244877 ACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGG 244936 | || | | | ||||| |||||| | ||| || ||||||||| Sbjct 870973 ATGGTACGTCTTCCACGTCCCTCGCGCTCGTATCTCTCGTAGAGACGTTCGAACTCGTCT 870914 Query 244937 CCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCG 244996 || |||| ||| || || ||| | || || | | |||| ||||| | | | Sbjct 870913 CCGTAGACATCGGAAAGACCTGGGGCCTCCGATGGAGAGAAGAGAGTCCACGTGGAGTTG 870854 Query 244997 TCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTC 245056 ||| ||| | || |||||||||||| || ||||| ||||| |||| | ||| | || Sbjct 870853 GCCTCGACACGCTTCATGAAGAGGTCAGGAATCCACAGGGCTGGGAACAAGTCACGGGCA 870794 Query 245057 CTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGC 245116 | ||| ||| || ||| || | | || | ||| |||| ||| ||||| Sbjct 870793 CGGATCTCCTCCTTACCGTGGTTTTTACGGATGTCGGTGAGGTCGAAGATGTCAGCGTGC 870734 Query 245117 CAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CAT 245175 || ||||| | ||||| |||| ||| || || | |||||| || || |||||||| | Sbjct 870733 CATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTACCACCTTGGTCCACGTAA 870674 Query 245176 CCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGT 245235 | || | |||||||| || | | || | || ||||| || |||||||| Sbjct 870673 CGGGCCGTG-TTGTTGAAGACACGGACCATTGGAATGATACCGTTGGAAGTACCGTTGGT 870615 Query 245236 GCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGC 245295 || ||||| | ||| || | | || |||| |||| || || | ||| ||||| Sbjct 870614 ACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAACCGATTCCACCGGC 870555 Query 245296 GTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGA 245355 | |||||||||||| || || ||| | || || || || || ||| |||| Sbjct 870554 GGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTC 870495 Query 245356 CTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG-GGGCTTGGGGCTGCACGAGTTGAACA 245414 ||||||| | || ||||| || |||| || || | ||| | | | | |||||||| Sbjct 870494 CTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAG-TACCGGCGTTGAACA 870436 Query 245415 GAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAG 245474 |||| || ||||| || ||||| || ||| | || ||| |||| ||| | Sbjct 870435 GAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTAAGTCTCGAGGACTT 870376 Query 245475 CGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGCGTCT 245534 || |||||||| ||||| | ||| ||||||| ||||||| || ||| Sbjct 870375 TTTCAATGTTGTCCGAGTGGACACCAATGGCAACTCTCATGATCATGTGCTGAGGTCTCT 870316 Query 245535 CG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAA 245591 || | || ||| || | || | ||| || ||||| || |||||||| |||| Sbjct 870315 CGGCAACTTTACCGTCGACTC---TCAGAAGGTAAGAACGCTCCAGGGTCTTGAATCCAA 870259 Query 245592 AGTA 245595 |||| Sbjct 870258 AGTA 870255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339022936400