Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 196 6e-45 seq4 98.7 1e-15 >seq1 Length=2842153 Score = 196 bits (216), Expect = 6e-45 Identities = 933/1464 (64%), Gaps = 29/1464 (2%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| |||| ||||||||||| |||||||| |||| ||||| ||| |||| |||||| Sbjct 871711 TAGATGTTGGAAGTGTATGGCTCGAAGCACTCGTTGTAACCCATGATCTGGGAGGTGGAA 871652 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| || |||| | || ||| | || || | | || || Sbjct 871651 GCAGTTGGCATTGGAGCCACCAAGAGCGAGTTTCTAAGTCCGGTCTTGGCGATCTTAGCC 871592 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCT-TTGTCTCCCCCTGCCACATATCAAACTGGAG 114120 || | | |||||||| | || | ||| || | ||||| ||| |||| | Sbjct 871591 TTCAACTCATCCCAGTCCCACA-GATCGGTTGGCTTCTTGCCCCACAGATCGTACTGCAA 871533 Query 114121 GATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAA 114180 |||||| | |||||||||||| ||||| | |||||||| || || | ||||| Sbjct 871532 GATACCCTTGGAGGCTGGCGAGCCCTCGTAGGTCTCGTACACACCTTCCTCGGTGGCCAA 871473 Query 114181 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 114240 ||||| ||||| | |||||||| || || ||||| || || | ||||| | Sbjct 871472 CTCGGACGAAGCCTCCAAAGCTGCGTGGTAGATGGTCTCGAAGATCTGGATATTCAACTC 871413 Query 114241 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 114300 |||||| ||| || || | || ||||||| | || || || | |||||| Sbjct 871412 ACGGGCCTCTGGGGAGTCGAATGGCAGACGGCACAGGAAGAAAGTGTCGGCCAAACCTTG 871353 Query 114301 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGAT 114359 |||||||| ||| || | | |||||| ||||| ||||| ||| | | || | Sbjct 871352 CACACCGAGAGCAACAGGTCTGTTTCTCATGTTAGAACGGCGAGCC-TCTGGAACTGGGT 871294 Query 114360 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 114419 | | |||| || || || | || | || || | |||||| |||| | || | Sbjct 871293 AGTAGTTCCGGTCAATGACACAGTTCAAGTTACGAGTAAGAACCTTGATGATCTGGTGCA 871234 Query 114420 GCTTTTCGTAATCAAAACTGCGAG-TCTCTT--CATTGACATACTTAGGAAGGGC----- 114471 ||| || | | || | || | | || | ||| | | || || ||| Sbjct 871233 ACTTCTCAAAGTTGTAAGAGGAAGATTTGTTGGCGTTGTCCTGCTCGACAAAGGCTGGCA 871174 Query 114472 ----GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 114527 || || |||| ||||| || | || || | | |||||| | || | Sbjct 871173 AGCAGACGGAAGCCAAGTTACAGACGGCAACTTCCTCTGGAGAGGAGTACTCAACAACCT 871114 Query 114528 CCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 114587 | ||||| || ||| ||| ||||| |||| ||||| || || ||||| ||| | Sbjct 871113 CACAGCACAAGTTGGAAGACTTGATGGTACCCAGGTTCTGCTGGTTGGACTTGCGGTTGC 871054 Query 114588 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 114647 | || |||||||| | |||| |||| || || ||||| || |||| || | || | Sbjct 871053 AAGCGTCCTTGTAGACCATGAATGGAGTACCAGTCTCGGTCTGGGCCTCCAAGATGTGGT 870994 Query 114648 TCCAGA-CATCGGCGGCTGGCACAGTGGCGT-TGGCTCGCCCCTCCTCCTCGTACTTTGT 114705 ||| | | || | | || | | || ||| | | || ||||| |||||| | Sbjct 870993 ACCACAGCTTCTGGGCCTTG-ATGGTA-CGTCTTCCACGTCCCTCGCGCTCGTATCTCTC 870936 Query 114706 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 114765 |||||| ||| ||||| || || | | || || || ||||| |||| ||| | Sbjct 870935 GTAGAGACGTTCGAACTCGTCTCCGTAGACATCGGAAAGACCTGGGGCCTCCGATGGAGA 870876 Query 114766 GAAGAGAGACCA--TTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAG 114823 |||||||| ||| | || | ||| |||||||||||||||||||| || ||||| Sbjct 870875 GAAGAGAGTCCACGTGGAGTTGGC--CTCGACACGCTTCATGAAGAGGTCAGGAATCCAC 870818 Query 114824 AGAGCTGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 114882 || |||| ||| | || | | || || | || || | || || || ||| | || Sbjct 870817 AGGGCTGGGAACAAGTCACGGGCACGGATC-TCCTCCTTACCGTGGTTTTTACGGATGTC 870759 Query 114883 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTAC 114941 | ||| | ||| || |||||||| || || ||||| | ||||| | ||| | Sbjct 870758 GGTGAGGTCGAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCT 870699 Query 114942 GACG--ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAAT 114999 | |||| | |||| || || | || ||| || || || || | ||||||||| Sbjct 870698 CTTGTTACCACCTTGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAAT 870639 Query 115000 GATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATG 115059 |||||| | || || || || || ||| ||| | |||| | || | || Sbjct 870638 GATACCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTG 870579 Query 115060 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 115119 |||||||| ||| || || || || ||| ||||| | || |||| | | | | | | Sbjct 870578 GATGTGCAAACCGATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATC 870519 Query 115120 GTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGG 115179 |||||| || ||||| ||||| |||| | || | | |||||| ||||||||| || Sbjct 870518 GTAGATACCTTCGATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGG 870459 Query 115180 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 115239 | ||| ||||| |||||||| || ||||| | ||||| |||| || | ||||| Sbjct 870458 ACGTGGAGTACCGGCGTTGAACAGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACAT 870399 Query 115240 CTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299 | ||| ||||| | ||| ||||| ||| ||| | ||| || | || | Sbjct 870398 GAGGTTGTAAGTCTCGAGGACTTTTTCAATGTTGTCCGAGTGGACACCAATGGCAACTCT 870339 Query 115300 CATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTT 115359 ||| | ||||| || ||| | || | |||| |||| ||| | |||||| Sbjct 870338 CATGATCATGTGCTGAGGTCTCTCGGCAACTTTACCGTCGACTCTCAGAAGGTAAGAACG 870279 Query 115360 CTCCAAGGTCTTGAGACCAAAATA 115383 ||||| |||||||| ||||| || Sbjct 870278 CTCCAGGGTCTTGAATCCAAAGTA 870255 Score = 143 bits (158), Expect = 3e-29 Identities = 697/1093 (64%), Gaps = 23/1093 (2%) Strand=Plus/Plus Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617 |||||| |||||| |||| | || | |||| || || | ||||||||| || ||| Sbjct 1667449 TCAAGG-TGAACTTGATGGCTTCCGACGGAGCCTGTGTGCGTAAGTAGTACATTCCAGTC 1667507 Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677 || | |||| |||||| || || | ||||| | || |||||| || || | | | Sbjct 1667508 TTCAATCCCTTCTTCCAAGCGTAAAAGTGCATGCTAGTCATCTTGGAAAGAGT-GCAGTC 1667566 Query 113678 TCCA-TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCA-CGATCCGCCGCCA 113735 | | |||| ||||||||||| ||||| ||||| | | || | | ||||| || |||| Sbjct 1667567 GCGAATGAATAGGTTCATACTCTGGGACTGATCAACATA-CGGCGAGCGATCTGCTGCCA 1667625 Query 113736 TATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCAT 113795 | || |||||||| | ||| ||||| || |||||||| ||| ||| | ||||| Sbjct 1667626 TGTCTATCACATCACGCTGGGAGATCTCCCAAACCGTTCTGTACCGGTGCTTGAGATCAT 1667685 Query 113796 CTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATAT 113855 | || | || |||| |||||| || || | | ||| ||||| | Sbjct 1667686 CAGGCACATGATCGATGCCTTGGATCGATCCGTTAGAAGCAATAATGGAGTCCTTAGCCT 1667745 Query 113856 CCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAA 113915 | || | ||| | |||| ||||| || || | || | | ||||| || | Sbjct 1667746 CTTTCGTCCATAATCCAAGGGCAGCAAGATCATCAACCATATACCTGTTGACGACCTGAT 1667805 Query 113916 ACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCAT 113975 ||| |||| || | |||| || | |||| ||| || ||||||| || Sbjct 1667806 GCTCTCCCGACAGAACTCTTCTCGTGTACAGGTTGGAAGTGAGAGGACCAAAGCATTCGC 1667865 Query 113976 TGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTAC 114035 ||| |||||||| || | || || ||||||||||| |||| | || | ||| | Sbjct 1667866 TGTATCCCAAGATCTGCGAAGTCGAAGCTGTGGGCATCAGTGCTACCAGCAACGAGTTGC 1667925 Query 114036 GGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCT-TTGTC 114094 | || || | | || || ||| || | ||||||| | | || | ||| | Sbjct 1667926 GCAGCCCATAGTTGGCGATATCTTTCTTCAGAGAAGCCCAGTCCCA-TAGATCACTTGGC 1667984 Query 114095 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTC 114154 ||| ||||||||| | ||||| | ||||| ||| || ||||| || ||| ||| | Sbjct 1667985 TCCGTGCCCCACATATCGTATTGGAGAACACCTTTGGATGCAGGCGACCCATCATATGAC 1668044 Query 114155 TCGTATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCTCGAGGGCTGCGTGATAC 114211 |||| || || | || | ||| ||| | || || | ||| ||||||| Sbjct 1668045 GAATATGTTCCATCTTTCCGTGCAAGTTCCACGGA--TTGC-TCTAAAGCTCCGTGATAT 1668101 Query 114212 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGG 114271 || |||||||| || | |||| | ||| ||| ||| || || | | ||| Sbjct 1668102 ATCGTCTCAAAGATCTGCCTGTTCAACTCTTTGCTCTCTGGAGAACCATACACCATTCGA 1668161 Query 114272 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 114331 | || ||| ||| ||||| || || ||||| | | || || || || ||||| Sbjct 1668162 AGCTTCATGAATGTATCAGCGAGTCCCTGAACACCAACAGCCATAGGACGGTGCCTCATG 1668221 Query 114332 TTAGACTTTCGAGCGGTCTCC--ACGGGATAAAAATTCCTATCGATAACCCTATTTAGAT 114389 || || ||| | ||| | ||||| || | | |||||||| ||| |||| || | Sbjct 1668222 TTGGAGCGACGA-CACTCTTCTAACGGG-TACTCAGTTCTATCGATGACCTTATTGAGGT 1668279 Query 114390 TTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTT 114449 | || ||||| || | | ||| | | | | || || || || | Sbjct 1668280 TGCGAACTACCACCTTGGTCACCTTATGCAACAGCTTAAAGTCGAACTTG------TCGT 1668333 Query 114450 CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 114509 | |||| | | ||||| | | || | ||||| ||||| | ||||||| || Sbjct 1668334 CGCTGACGAATGTCGGAAGACCCAACGAGGATAGATTGCACACTGCAATCTCATCTTTCG 1668393 Query 114510 CAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTT 114569 | ||| || | |||||| ||||| ||| || ||||||||| ||||||||||||| Sbjct 1668394 ATGAGTATTCGACAATTTCACAACACAGATTGGACGACTTAATGGTTCCCAAGTTCTTTT 1668453 Query 114570 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 114629 | || || || ||| || |||||||||||||||||| |||| || || ||||| || | Sbjct 1668454 GGTTCGATTTCCGGTTGCATGCATCCTTGTAAAGCATGAATGGAGTACCTGTCTCTGTCT 1668513 Query 114630 GGGACTTGAGAAT 114642 | || | ||||| Sbjct 1668514 GCGAGTATAGAAT 1668526 >seq4 Length=1514682 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/224 (71%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 ||||| || | | ||||||| || || |||||| || |||||||||||||| | |||| Sbjct 728732 CCCTCATCTCTGCAGATGAGCTCGTTGGAGAAGGTGAGACCTGGCATGAGACCTCTCTTC 728791 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| |||| | || || || ||||||||||| || || | ||| | Sbjct 728792 TTGAGCCAGAAGATCGAAGCGAACGATCCTGAGAAGAAGATACCTTCGATGGCAGCGTAG 728851 Query 126185 GCAAAGAGACGCTCAGC--AAAGGAGCGCGACTTTG-TGTCAAACCACTTCATCGCCCAC 126241 || | ||||||||||| ||||| ||| | ||| | || | ||| | | ||||| Sbjct 728852 GCGATCAGACGCTCAGCGTAAAGG---GCGTCCTTGTTCTCCATCCATCTGACGGCCCAG 728908 Query 126242 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 | ||||| | || |||| |||| | ||| ||| || ||||| Sbjct 728909 AGGGCCTTCTCCTTGATAGGTGGGATGTTCTCGATGGCCTCAAA 728952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353487996200