Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq4 123 3e-23
seq3 105 7e-18
>seq4
Length=1514682
Score = 123 bits (136), Expect = 3e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| || | ||| |||||| ||||| ||||| |||| ||||| | |||| ||
Sbjct 1333637 ACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 1333578
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
||||||||||| ||||| || |||| ||||||||| | || | | |||||||||| |
Sbjct 1333577 AGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGG 1333518
Query 42120 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
|| || || |||| ||| | | | |||||| || ||||| |||| |||||||| ||
Sbjct 1333517 ATCTTCTGCTTGA-CGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTT 1333459
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || || ||||| || || || |||||
Sbjct 1333458 ACCGGTCAGGGTCTTGACGAAAATCTGCAT 1333429
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| | | | |||||| || | ||| |||||| || || ||||| || |
Sbjct 89139 ACCACCTCTGAGTCTAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGA 89198
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | |||| || | |||||||||||| || || |||| ||||||||| | |||
Sbjct 89199 AAGGGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCTGGTGG 89258
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| || |||||| ||| ||| || || |||| | | | |||||| || |||||
Sbjct 89259 AATGCCCTCCTTATCCTGGATCTTCTGCTTGACGTTATCGATAGTGTCGGAGGACTCCAC 89318
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||||| || || || || | ||||| || ||||| |||||
Sbjct 89319 TTCAAGAGTGATTGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 89366
>seq3
Length=1705961
Score = 105 bits (116), Expect = 7e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| | | || ||||| || | || |||||| || || ||||| || |
Sbjct 1462857 ACCACCTCTCAGTCTCAGAACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 1462798
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || || |||| || | ||||||||||||||| || |||| ||||||||| | |||
Sbjct 1462797 AAGGGTACGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCAGGTGG 1462738
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | |||||||||| ||| || || |||| ||| | | | |||||| || || |
Sbjct 1462737 GATTCCCTCCTTGTCCTGGATCTTCTGCTTGA-CGTTGTCAATGGTGTCGGAAGACTCAA 1462679
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
| |||| ||||| || || || || || || || || || || ||||| ||
Sbjct 1462678 CCTCGAGGGTGATCGTCTTTCCGGTAAGGGTTTTAACGAAAATCTGCATCTT 1462627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212698147600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |