Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 255 6e-63 >seq1 Length=2842153 Score = 255 bits (282), Expect = 6e-63 Identities = 970/1493 (65%), Gaps = 52/1493 (3%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || || ||||||||||| || || || || || ||||| || || ||| || | | Sbjct 870429 CCAACTCTGTTCAACGCCGGTACTCCACGTCCTCAAATGTCGTCTTGCTTCTTGGTTGCC 870488 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| ||||||||| || || | ||| | | ||| | ||||| |||||| Sbjct 870489 ATGAAGGAGGACTCCATCGAAGGTATCTACGATACTTTGAAGCAGTGTGCTCTCATCTCC 870548 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || ||| || |||||||| | ||||| || | ||||||| || || ||||| Sbjct 870549 AAGACCGCCGGTGGAATCGGTTTGCACATCCACAACATCCGTGCCACTGGCTCTTACATT 870608 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 ||||||||| || || |||||||| || | || ||| |||| |||||||||||| || Sbjct 870609 GCCGGTACCAACGGTACTTCCAACGGTATCATTCCAATGGTCCGTGTCTTCAACAACACG 870668 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || || ||||||||||| |||||| | ||| ||| | |||| |||| |||||| Sbjct 870669 GCCCGTTACGTGGACCAAGGTGGTAACAAGAGACCTGGTGCCATCGCCATCTACCTCGAG 870728 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||||| ||| | | ||| |||| | || || |||||||| || || | Sbjct 870729 CCATGGCACGCTGACATCTTCGACCTCACCGACATCCGTAAAAACCACGGTAAGGA---G 870785 Query 94258 GAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 |||| | ||| | ||| | ||| || || ||| | || ||||| || ||||| || Sbjct 870786 GAGATCCGTGCCCGTGACTTGTTCCCAGCCCTGTGGATTCCTGACCTCTTCATGAAGCGT 870845 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCC-GGACTGTCCGA 94373 |||||| |||||| | |||| ||| || | | ||| | | | ||| || || ||||| Sbjct 870846 GTCGAGGCCAACTCCACGTGGACTCTCTTCTCT-CCATCGGAGGCCCCAGGTCTTTCCGA 870904 Query 94374 CGTTTGTGGA-TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 || | ||| || | || ||| | || | | |||| | ||| || | | Sbjct 870905 TGTCTACGGAGACGAG-TTCGAACGTCTCTACGAGAGATACG-AGCGCGAGG---GACGT 870959 Query 94433 GGAAG--GT--TATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488 ||||| || || | || |||||||||| | || ||| |||| | ||| ||| Sbjct 870960 GGAAGACGTACCATCAAGGCCCAGAAGCTGTGGTACCACATCTTGGAGGCCCAGACCGAG 871019 Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548 || ||||| || | ||| | | ||||||| || |||| |||||||||||||||| || Sbjct 871020 ACTGGTACTCCATTCATGGTCTACAAGGACGCTTGCAACCGCAAGTCCAACCAGCAGAAC 871079 Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608 || || |||||| || || ||||| ||| |||| ||||| | ||||| || Sbjct 871080 CTGGGTACCATCAAGTCTTCCAACTTGTGCTGTGAGGTTGTTGAGTACTCCTCTCCAGAG 871139 Query 94609 GAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCA--CTT--TCGTGC--GA-GA 94661 || |||| || |||||| ||| ||| || | || ||| ||| ||| || || | Sbjct 871140 GAAGTTGCCGTCTGTAACTTGGCTTCCGTCTGCTTG-CCAGCCTTTGTCGAGCAGGACAA 871198 Query 94662 TGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTG----TGAACTTCGCGGGAA 94717 ||| ||| | || | || | | | | ||| || ||| || | || || Sbjct 871199 CGCCAACAAAT---CTTCCTCTTACAACTTTGAGAAG-TTGCACCAGATCATC-----AA 871249 Query 94718 GGATGGT-CTTG-AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGC 94775 || | | || | ||| ||||| | || || ||| ||||| |||||| || || ||||| Sbjct 871250 GGTTCTTACTCGTAACTTGAACTGTGTCATTGACCGGAACTACTACCCAGTTCCAGAGGC 871309 Query 94776 GGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGC 94835 || ||| ||| | | || | | |||| || || ||||| || ||| | Sbjct 871310 TCGCCGTTCTAACATGAGAAACAGACCTGTTGCTCTCGGTGTGCAAGGTTTGGCCGACAC 871369 Query 94836 GCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACAT 94895 | | || |||||||| | |||||| || || | |||||| | | || Sbjct 871370 TTTCTTCCTGTGCCGTCTGCCATTCGACTCCCCAGAGGCCCGTGAGTTGAATATCCAGAT 871429 Query 94896 ATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCC-ACTTGGCCAGATCGGACG 94954 ||||| | ||| || ||| || || | | ||||| | ||||||| ||| | Sbjct 871430 CTTCGAGACCATCTACCACGCAGCTTTG-GAGGCTTCGTCCGAGTTGGCCACCGAGGAAG 871488 Query 94955 GCGGGCCACACGAATCGTTCCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGA 95012 | | | |||| | | | || ||||| | | | |||| || || |||| ||| Sbjct 871489 GTGTG---TACGAGACCTACGAGGGCTCGCCAGCCTCCA--AGGGTATCTTGCAGTACGA 871543 Query 95013 CCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTAT 95072 || ||||| |||||| | | ||||| |||||||| | | ||| | | Sbjct 871544 TCTGTGGGGCAAGAAGCCAACCGATCTGTGGGACTGGGATGAGTTGAAGGCTAAGATCGC 871603 Query 95073 CAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCA 95132 ||| ||| | | |||| |||| | ||||| || ||||| || || ||||| | || Sbjct 871604 CAAGACCGGACTTAGAAACTCGCTCTTGGTGGCTCCAATGCCAACTGCTTCCACCTCCCA 871663 Query 95133 GATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGT 95192 |||| | || ||||||||| ||||| || | ||| |||||| | ||| | | || Sbjct 871664 GATCATGGGTTACAACGAGTGCTTCGAGCCATACACTTCCAACATCTACTCGCGTAGAGT 871723 Query 95193 GCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGG 95251 ||||||||| || |||| || ||||| || | || || ||| | | || | || | Sbjct 871724 GCTCGCCGGTGAGTTCCAGATCGTCAACCCTTACATGCTCCGTGACTTGGTCGAC-CTTG 871782 Query 95252 GTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACA 95311 | | |||| || | |||||| | | | | | ||||| || ||||| || Sbjct 871783 GAATCTGGGACGATGCTATGAAGAACTACATCATCAGTGATAACGGTTCGATCCAGCACC 871842 Query 95312 TCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATC 95364 | || | | || || || ||||| | ||||||||||||||||||||||| Sbjct 871843 TTCCTAACGTTCCAGACGAACTCAAGAAGATCTACAAGACCGTGTGGGAGATC 871895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723107239400