Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 187 3e-42 seq4 100 3e-16 >seq1 Length=2842153 Score = 187 bits (206), Expect = 3e-42 Identities = 932/1468 (63%), Gaps = 35/1468 (2%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||||| ||||||||||| |||||||| |||| ||||| ||| |||| ||||| Sbjct 871711 TAGATGTTGGAAGTGTATGGCTCGAAGCACTCGTTGTAACCCATGATCTGGGAGGTGGAA 871652 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || ||||| || |||| | || ||| | || || | || || Sbjct 871651 GCAGTTGGCATTGGAGCCACCAAGAGCGAGTTTCTAAGTCCGGTCTTGGCGATCTTAGCC 871592 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCT-TTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 || | | |||||||| | || | ||| || | |||||| ||| |||| | Sbjct 871591 TTCAACTCATCCCAGTCCCACA-GATCGGTTGGCTTCTTGCCCCACAGATCGTACTGCAA 871533 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 |||||| | ||| |||||||| ||||| | ||||| || || || | ||||| Sbjct 871532 GATACCCTTGGAGGCTGGCGAGCCCTCGTAGGTCTCGTACACACCTTCCTCGGTGGCCAA 871473 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 ||||| ||||| | |||||||| || || ||||| || || | ||||| | Sbjct 871472 CTCGGACGAAGCCTCCAAAGCTGCGTGGTAGATGGTCTCGAAGATCTGGATATTCAACTC 871413 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 |||||| ||| || || | |||||||||| | || || || | |||||| Sbjct 871412 ACGGGCCTCTGGGGAGTCGAATGGCAGACGGCACAGGAAGAAAGTGTCGGCCAAACCTTG 871353 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA-CGGGAT 116320 |||||||| ||| || | | |||||| ||||| ||||| ||| | | || | Sbjct 871352 CACACCGAGAGCAACAGGTCTGTTTCTCATGTTAGAACGGCGAGCC-TCTGGAACTGGGT 871294 Query 116321 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 116380 | | |||| || || || | || | || || | |||||| |||| | || | Sbjct 871293 AGTAGTTCCGGTCAATGACACAGTTCAAGTTACGAGTAAGAACCTTGATGATCTGGTGCA 871234 Query 116381 GCTTTTCGTAATCAAAACTGCGAG-TCTCTT--CATTGACATACTTAGGAAGGGC----- 116432 ||| || | | || | || | | || | ||| | | || || ||| Sbjct 871233 ACTTCTCAAAGTTGTAAGAGGAAGATTTGTTGGCGTTGTCCTGCTCGACAAAGGCTGGCA 871174 Query 116433 ----GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 116488 || || |||| ||||| || | || || | | |||||| | || | Sbjct 871173 AGCAGACGGAAGCCAAGTTACAGACGGCAACTTCCTCTGGAGAGGAGTACTCAACAACCT 871114 Query 116489 CCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 116548 | ||||| || ||| ||| ||||| |||| ||||| || || ||||| ||| | Sbjct 871113 CACAGCACAAGTTGGAAGACTTGATGGTACCCAGGTTCTGCTGGTTGGACTTGCGGTTGC 871054 Query 116549 ACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 116608 | || |||||||||| ||| |||| || || ||||| || |||| || | || | Sbjct 871053 AAGCGTCCTTGTAGACCATGAATGGAGTACCAGTCTCGGTCTGGGCCTCCAAGATGTGGT 870994 Query 116609 TCCATA-CATCGGCGGCTGGCACAGTGGCGT-TGGCTCGCCCCTCCTCCTCGTACTTTGT 116666 ||| | | || | | || | | || ||| | | || ||||| |||||| | Sbjct 870993 ACCACAGCTTCTGGGCCTTG-ATGGTA-CGTCTTCCACGTCCCTCGCGCTCGTATCTCTC 870936 Query 116667 GTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACA 116726 |||||| || ||||| || || | || || || ||||| |||| |||| | Sbjct 870935 GTAGAGACGTTCGAACTCGTCTCCGTAGACATCGGAAAGACCTGGGGCCTCCGATGGAGA 870876 Query 116727 GAAGAGAGACCA--TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 116784 |||||||| ||| | || | ||| || ||||||||||||||||| || ||||| Sbjct 870875 GAAGAGAGTCCACGTGGAGTTGGC--CTCGACACGCTTCATGAAGAGGTCAGGAATCCAC 870818 Query 116785 AGCGCCGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843 || || | ||| | || || || || || || | | || || || ||| | || Sbjct 870817 AGGGCTGGGAACAAGTCACGGGCACGGATCTCCTCCTTACCG-TGGTTTTTACGGATGTC 870759 Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------ 116897 | ||| | ||| || |||||||| || || ||||| | ||||| | || Sbjct 870758 GGTGAGGTCGAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCT 870699 Query 116898 CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGG 116957 |||| || ||| |||| || || | ||||| ||| || || || | |||||| Sbjct 870698 CTTGTTACCACCT---TGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGG 870642 Query 116958 AATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATC 117017 ||||||||| | || || || || || ||| ||| |||| | || | Sbjct 870641 AATGATACCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTT 870582 Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077 ||||||||||| ||| || || || || ||| ||||| | || |||| | | | | | Sbjct 870581 GTGGATGTGCAAACCGATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGT 870522 Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137 ||||||| || ||||| ||||| |||| | || | | |||||| ||||||||| Sbjct 870521 ATCGTAGATACCTTCGATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTG 870462 Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 117197 || | ||| ||||| |||||||| || ||||| | ||||| |||| || | || Sbjct 870461 AGGACGTGGAGTACCGGCGTTGAACAGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGA 870402 Query 117198 CATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGAC 117257 ||| | ||| ||||| | ||| ||||| ||| ||| | ||| || | || Sbjct 870401 CATGAGGTTGTAAGTCTCGAGGACTTTTTCAATGTTGTCCGAGTGGACACCAATGGCAAC 870342 Query 117258 CCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACT 117317 | ||| | ||||| || ||| | || | |||| |||| ||| | |||||| Sbjct 870341 TCTCATGATCATGTGCTGAGGTCTCTCGGCAACTTTACCGTCGACTCTCAGAAGGTAAGA 870282 Query 117318 CTTCTCCAAGGTCTTGAGACCAAAATAG 117345 ||||| |||||||| ||||| ||| Sbjct 870281 ACGCTCCAGGGTCTTGAATCCAAAGTAG 870254 Score = 134 bits (148), Expect = 2e-26 Identities = 697/1099 (63%), Gaps = 35/1099 (3%) Strand=Plus/Plus Query 115519 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 115578 |||||| |||||| |||| | || | |||| || || | ||||||||| || ||| Sbjct 1667449 TCAAGG-TGAACTTGATGGCTTCCGACGGAGCCTGTGTGCGTAAGTAGTACATTCCAGTC 1667507 Query 115579 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT 115638 || | |||| |||||| || || | ||||| | || |||||| || || | | | Sbjct 1667508 TTCAATCCCTTCTTCCAAGCGTAAAAGTGCATGCTAGTCATCTTGGAAAGAGT-GCAGTC 1667566 Query 115639 TCCA-TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCAT 115697 | | |||| ||||||||||| ||||| ||||| | | | ||||| || ||||| Sbjct 1667567 GCGAATGAATAGGTTCATACTCTGGGACTGATCAACATACGGCGAGCGATCTGCTGCCAT 1667626 Query 115698 ATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATC 115757 || |||||||| | ||| ||||| || |||||||| ||| ||| | |||||| Sbjct 1667627 GTCTATCACATCACGCTGGGAGATCTCCCAAACCGTTCTGTACCGGTGCTTGAGATCATC 1667686 Query 115758 TGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATC 115817 || | || |||| |||||| || || | | ||| ||||| || Sbjct 1667687 AGGCACATGATCGATGCCTTGGATCGATCCGTTAGAAGCAATAATGGAGTCCTTAGCCTC 1667746 Query 115818 CTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAA 115877 || | ||| | |||| ||||| || || | | | | ||||| || | Sbjct 1667747 TTTCGTCCATAATCCAAGGGCAGCAAGATCATCAACCATATACCTGTTGACGACCTGATG 1667806 Query 115878 CTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATT 115937 ||| |||| || | |||| || | ||||| ||| || ||||||| || | Sbjct 1667807 CTCTCCCGACAGAACTCTTCTCGTGTACAGGTTGGAAGTGAGAGGACCAAAGCATTCGCT 1667866 Query 115938 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCG 115997 || |||||||| || | || || ||||||||||| |||| | || | |||||| Sbjct 1667867 GTATCCCAAGATCTGCGAAGTCGAAGCTGTGGGCATCAGTGCTACCAGCAACGAGTTGCG 1667926 Query 115998 GAGACCCACCCCCCTAAT--GCG-----TTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCT 116050 || ||| || | ||| || ||| || | ||||||| | | || | Sbjct 1667927 CAG-------CCCATAGTTGGCGATATCTTTCTTCAGAGAAGCCCAGTCCCA-TAGATCA 1667978 Query 116051 -TTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCA 116109 ||| |||| |||||||||| | ||||| | ||||| ||| || ||||| || ||| Sbjct 1667979 CTTGGCTCCGTGCCCCACATATCGTATTGGAGAACACCTTTGGATGCAGGCGACCCATCA 1668038 Query 116110 AATGTCTCATATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCTCGAGGGCTGCG 116166 ||| | ||||| || || | || | ||| ||| | || || | ||| || Sbjct 1668039 TATGACGAATATGTTCCATCTTTCCGTGCAAGTTCCACGGA--TTGC-TCTAAAGCTCCG 1668095 Query 116167 TGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG 116226 ||||| || |||||||| || | |||| | ||| ||| ||| || || | Sbjct 1668096 TGATATATCGTCTCAAAGATCTGCCTGTTCAACTCTTTGCTCTCTGGAGAACCATACACC 1668155 Query 116227 AGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGT 116286 | || | || ||| ||| ||||| || || ||||| | | || || || || Sbjct 1668156 ATTCGAAGCTTCATGAATGTATCAGCGAGTCCCTGAACACCAACAGCCATAGGACGGTGC 1668215 Query 116287 CTCATATTAGACTTTCGAGCGGTCTCC--ACGGGATAAAAATTCCTATCGATAACCCTAT 116344 ||||| || || ||| | ||| | ||||| || | | |||||||| ||| ||| Sbjct 1668216 CTCATGTTGGAGCGACGA-CACTCTTCTAACGGG-TACTCAGTTCTATCGATGACCTTAT 1668273 Query 116345 TTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAG 116404 | || || || ||||| || | | ||| | | | | || || || Sbjct 1668274 TGAGGTTGCGAACTACCACCTTGGTCACCTTATGCAACAGCTTAAAGTCGAACTTG---- 1668329 Query 116405 TCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCAT 116464 || || |||| | | ||||| | | || | ||||| ||||| | |||||| Sbjct 1668330 --TCGTCGCTGACGAATGTCGGAAGACCCAACGAGGATAGATTGCACACTGCAATCTCAT 1668387 Query 116465 CCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGT 116524 | || | ||| || | |||||| ||||| ||| || ||||||||| ||||||| Sbjct 1668388 CTTTCGATGAGTATTCGACAATTTCACAACACAGATTGGACGACTTAATGGTTCCCAAGT 1668447 Query 116525 TCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCT 116584 ||||||| || || || ||| || ||||||||||| ||||| |||| || || |||| Sbjct 1668448 TCTTTTGGTTCGATTTCCGGTTGCATGCATCCTTGTAAAGCATGAATGGAGTACCTGTCT 1668507 Query 116585 CCGTTTGGGACTTGAGAAT 116603 | || || || | ||||| Sbjct 1668508 CTGTCTGCGAGTATAGAAT 1668526 >seq4 Length=1514682 Score = 100 bits (110), Expect = 3e-16 Identities = 158/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 ||||| || | | ||||||| || || |||||| ||||||||||||||||| | |||| Sbjct 728732 CCCTCATCTCTGCAGATGAGCTCGTTGGAGAAGGTGAGACCTGGCATGAGACCTCTCTTC 728791 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 || | |||||| |||| | || || || ||||||||||| || || | ||| | Sbjct 728792 TTGAGCCAGAAGATCGAAGCGAACGATCCTGAGAAGAAGATACCTTCGATGGCAGCGTAG 728851 Query 127658 GCAAATAGACGCTCGGC--AAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCCCACT 127715 || | |||||||| || ||||| || | ||| | || | ||| | | ||||| Sbjct 728852 GCGATCAGACGCTCAGCGTAAAGG-GC-GTCCTTGTTCTCCATCCATCTGACGGCCCAGA 728909 Query 127716 GTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758 | ||||| | || |||| ||||| | ||| ||| || ||||| Sbjct 728910 GGGCCTTCTCCTTGATAGGTGGGATGTTCTCGATGGCCTCAAA 728952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507084967400