Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 102 1e-16 >seq1 Length=2842153 Score = 102 bits (112), Expect = 1e-16 Identities = 315/477 (66%), Gaps = 8/477 (2%) Strand=Plus/Minus Query 203846 ACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTT 203905 || |||||||| |||||| |||||| | | | | ||| |||||||| || ||||| Sbjct 872092 ACAGTGAACTGGATGGCGGCAGCGGCAGCCTGGGTACGCAGGTAGTACATACCAGTCTTA 872033 Query 203906 AGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACG-TTGGGGTCGGC 203964 |||||||||| ||| || || | |||||| || | | || | || | |||| | | Sbjct 872032 AGGCCCTTCTTCCAACCATAGAAGTGCATCGAGGTGATCTTACCCATGGTTGGAGACTTG 871973 Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATAT 204023 | ||| ||||||| |||| | ||||| | | | ||| || | || |||||||| | Sbjct 871972 -AGGTGGATGTTCATCGACTCGGACTGGTCAACGTA-GGCACCTCTGTCGGCGGCCATGT 871915 Query 204024 TGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGTGTTGA 204082 ||| || ||| || || ||||||||||| |||||| | | | ||| || | | Sbjct 871914 CGATGATTCCCTTTTGGGAGATCTCCCACACGGTCTTGTAGATCTTCT-TGAGTTCGTCT 871856 Query 204083 GGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTC 204141 || || | | | || || |||||| ||||| || || | || || | | Sbjct 871855 GGAACGT-TAGGAAGGTGCTGGATCGAACCGTTATCACTGATGATGTAGTTCTTCATAGC 871797 Query 204142 CTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAA 204201 || |||| || || | || || || || | || || ||||||| |||||| || Sbjct 871796 ATCGTCCCAGATTCCAAGGTCGACCAAGTCACGGAGCATGTAAGGGTTGACGATCTGGAA 871737 Query 204202 GTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTT 204261 || |||| ||||| | || | | | | |||| ||| |||| ||||| |||||| Sbjct 871736 CTCACCGGCGAGCACTCTACGCGAGTAGATGTTGGAAGTGTATGGCTCGAAGCACTCGTT 871677 Query 204262 GTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTT 204318 || || | ||||| | |||| || || ||||| ||||||| | || ||||| Sbjct 871676 GTAACCCATGATCTGGGAGGTGGAAGCAGTTGGCATTGGAGCCACCAAGAGCGAGTT 871620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155050908400