Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 1e-16
>seq1
Length=2842153
Score = 102 bits (112), Expect = 1e-16
Identities = 315/477 (66%), Gaps = 8/477 (2%)
Strand=Plus/Minus
Query 203846 ACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTT 203905
|| |||||||| |||||| |||||| | | | | ||| |||||||| || |||||
Sbjct 872092 ACAGTGAACTGGATGGCGGCAGCGGCAGCCTGGGTACGCAGGTAGTACATACCAGTCTTA 872033
Query 203906 AGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACG-TTGGGGTCGGC 203964
|||||||||| ||| || || | |||||| || | | || | || | |||| | |
Sbjct 872032 AGGCCCTTCTTCCAACCATAGAAGTGCATCGAGGTGATCTTACCCATGGTTGGAGACTTG 871973
Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATAT 204023
| ||| ||||||| |||| | ||||| | | | ||| || | || |||||||| |
Sbjct 871972 -AGGTGGATGTTCATCGACTCGGACTGGTCAACGTA-GGCACCTCTGTCGGCGGCCATGT 871915
Query 204024 TGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGTGTTGA 204082
||| || ||| || || ||||||||||| |||||| | | | ||| || | |
Sbjct 871914 CGATGATTCCCTTTTGGGAGATCTCCCACACGGTCTTGTAGATCTTCT-TGAGTTCGTCT 871856
Query 204083 GGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTC 204141
|| || | | | || || |||||| ||||| || || | || || | |
Sbjct 871855 GGAACGT-TAGGAAGGTGCTGGATCGAACCGTTATCACTGATGATGTAGTTCTTCATAGC 871797
Query 204142 CTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAA 204201
|| |||| || || | || || || || | || || ||||||| |||||| ||
Sbjct 871796 ATCGTCCCAGATTCCAAGGTCGACCAAGTCACGGAGCATGTAAGGGTTGACGATCTGGAA 871737
Query 204202 GTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTT 204261
|| |||| ||||| | || | | | | |||| ||| |||| ||||| ||||||
Sbjct 871736 CTCACCGGCGAGCACTCTACGCGAGTAGATGTTGGAAGTGTATGGCTCGAAGCACTCGTT 871677
Query 204262 GTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTT 204318
|| || | ||||| | |||| || || ||||| ||||||| | || |||||
Sbjct 871676 GTAACCCATGATCTGGGAGGTGGAAGCAGTTGGCATTGGAGCCACCAAGAGCGAGTT 871620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795155050908400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |