Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq4 120 3e-22
>seq4
Length=1514682
Score = 120 bits (132), Expect = 3e-22
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || |||||||| || ||||| | |||| ||||||||||| ||||||||
Sbjct 1333620 CTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCGAGCTGCTTACCGGCGAA 1333561
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | | ||||||||| | || | | |||||||||| |||||||| ||||| |||
Sbjct 1333560 GATAAGTCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGGATCTTCTGCTTGA-CGT 1333502
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| || ||||| || | |||||||| || || ||||| || || |
Sbjct 1333501 TGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTGA 1333442
Query 46581 CAAAGATTTGCAT 46593
| || || |||||
Sbjct 1333441 CGAAAATCTGCAT 1333429
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| ||||| ||||| || || | | || || | |||||| ||||| ||
Sbjct 89403 CTCCTTTTGGATGTTGTAATCGGAAAGGGTTCTGCCATCCTCCAACTGCTTACCGGCAAA 89462
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | || |||||||| | || | | ||||| ||| |||||| | ||||| |||
Sbjct 89463 GATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGGATCTTTTGCTTGA-CGT 89521
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||| || || || || | |||||||| || || || || || || |
Sbjct 89522 TGTCAATGGTGTCTGAGGACTCAACCTCGAGTGTGATGGTCTTACCTGTGAGGGTCTTGA 89581
Query 46581 CAAAGATTTGCAT 46593
| ||||| |||||
Sbjct 89582 CGAAGATCTGCAT 89594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238294017800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |