Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq4 208 8e-49
seq3 125 7e-24
>seq4
Length=1514682
Score = 208 bits (230), Expect = 8e-49
Identities = 577/870 (66%), Gaps = 21/870 (2%)
Strand=Plus/Plus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
||||| || || ||||| || || | | ||| ||| | ||| || || || |||||
Sbjct 728441 TTCTCGAAGAAGTTAGTCTTACCAGCGAGGGAGATGTTCTCCATGAAGTCGAATGGGTTT 728500
Query 132685 GCTGTGTTGTAGTGCTTGGTGCCGATCA--GGTCGACGAGCAGCCTGTCGGCCACGAACT 132742
| |||||| ||| ||| | || || | |||||| ||||| || |||||
Sbjct 728501 GTAACGTTGTACACCTTCTTGCA-ACCAACGGAAG-CGAGCAATCTGTCAGCACAGAACT 728558
Query 132743 CGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACC-GGCAGCGCTTCG 132801
||| ||| || ||||| ||||| || | || |||| | | || || | || ||
Sbjct 728559 CGACGTACTGGCACATGAGGTCGCAGTTCATACCGAGCAAA-GAACATGGTAAGGCATCC 728617
Query 132802 GTG-AGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860
| |||| | || |||||| |||| || ||||||| |||| | ||| || |
Sbjct 728618 TTCCAGAAGGACTT-CTCGATATCGACAGCCTCGGTGATGATTCTGGTGACGATGGCTGG 728676
Query 132861 G-CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919
| || | |||| | | ||| ||| | ||||| || |||||| ||||||||||
Sbjct 728677 GTCTGGAGTGTTGT-CGAGGTGCGAGAAGAGTAAGCAGGCGAAGTCGGTGTGCAAGCCCT 728735
Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979
| || ||| | ||||| |||||| ||| || | || |||||||| || | || ||||
Sbjct 728736 CATCTCTGCAGATGAGCTCGTTGGAGAAGGTGAGACCTGGCATGAGACCTCTCTTCTTGA 728795
Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039
|||| || || | ||||| || || ||||||| || |||| ||| ||| | || |
Sbjct 728796 GCCAGAAGATCGAAGCGAACGATCCTGAGAAGAAGATACCTTCGATGGCAGCGTAGGCGA 728855
Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099
||| ||||| || | ||| || ||| | | ||||| | | ||||| |||||
Sbjct 728856 TCAGACGCTCAGCGTAAAGGGCGTCCTTGTTCTCCATCCATCTGACGGCCCAGAGGGCCT 728915
Query 133100 TTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTT----TCTCTTCC 133155
| || |||| || || | |||||||| | ||||| | |||| || |||
Sbjct 728916 TCTCCTTGATAGGTGGGATGTTCTCGATGGCCTCAAACAA--GTAGTTGGCCTCGCTTTT 728973
Query 133156 GAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATG 133215
| | | |||||||||||| || || || | || ||||| | ||||||||
Sbjct 728974 GTCGGTG--ATGTAGGTGTCGATCAGCACGGAGTAAGTCTCGGAGTGGATGTTCTCCACC 729031
Query 133216 GCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGC 133275
||| || |||||||| ||| || ||||| || ||| || || || ||| |
Sbjct 729032 ATGATCTGGAAGCCGTAGAAGGCACGGGCCTCTGGCATCTGAACCTCAGTAGTGAAGTTC 729091
Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335
| | || || |||| |||||| |||||| |||||||| || || ||||| || |
Sbjct 729092 TGGCACAAGTTCTCGTCGACGATACCGTCGGAAGCGGCGAAGAATGCGAGCACACGCGAG 729151
Query 133336 ATGAAATGGCGCTCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392
||||| | | ||||||| ||||||| | | ||||||| | ||||| |||| |
Sbjct 729152 ATGAAGTATCTCTCGTTGGCGTTCAACTTGGTGTTCCAGTCGATCAGATCCTTAGACAAG 729211
Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCC 133452
|| | ||||||| |||||| || || |||||||| || |||||||| ||| |||||
Sbjct 729212 TCGATCTCCTCGGTGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTCCCAGATGTCG 729271
Query 133453 GAATATTGTATGGGAAAAATCACAAACCGG 133482
|| | || || || || |||||||||
Sbjct 729272 CTGTACTTGATAGGGAACATGACAAACCGG 729301
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || |||||||| |||| || ||| || |
Sbjct 89594 ATGCAGATCTTCGTCAAGACCCTCACAGGTAAGACCATCACACTCGAGGTTGAGTCCTCA 89535
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || |||| |||| || || || || || || | |||||
Sbjct 89534 GACACCATTGACAACG-TCAAGCAAAAGATCCAGGATAAGGAAGGTATCCCACCAGACCA 89476
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || || || | || || || ||| |||| || | | ||||| ||| |||||
Sbjct 89475 GCAACGTCTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACCCTTTCCGATTACAA 89416
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||| | ||||| || ||||| || | |||||||| ||
Sbjct 89415 CATCCAAAAGGAGTCTACGCTCCACTTGGTTCTCAGATTGAGAGGTGG 89368
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || || || ||||||||| |||| || ||| | ||
Sbjct 1333429 ATGCAGATTTTCGTCAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCC 1333488
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||||||||| | |||||
Sbjct 1333489 GACACCATTGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGAATTCCTCCAGACCA 1333547
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| | || || | ||| || || ||||| || |||| | || || ||||||||
Sbjct 1333548 GCAGAGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACTACAA 1333607
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| || ||||| | || || || ||||| || | ||||||| ||
Sbjct 1333608 CATTCAGAAGGAGTCCACCCTCCACTTGGTCCTTAGACTGAGAGGTGG 1333655
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || || || || ||||| | || || ||| || ||
Sbjct 88910 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACAATCACTCTTGAAGTGGAGTCCTCC 88851
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| || || || || || || | |||||
Sbjct 88850 GACACCATCGATAACG-TCAAGCAGAAGATCCAGGATAAGGAAGGTATCCCACCAGACCA 88792
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || || || | ||| || || ||| |||| || | | ||||| ||||||||
Sbjct 88791 GCAACGTCTTATCTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACCCTTTCAGACTACAA 88732
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGC 38474
|||||| |||||| | || || || ||||| || | | ||||||||| ||
Sbjct 88731 CATCCAGAAGGAATCTACACTCCACTTGGTCCTTAGACTTAGAGGCGGCTGC 88680
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || || || || ||||| | || || ||| || ||
Sbjct 89366 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACAATCACTCTTGAAGTGGAGTCCTCC 89307
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| || || ||||| ||||| | |||||
Sbjct 89306 GACACTATCGATAACG-TCAAGCAGAAGATCCAGGATAAGGAGGGCATTCCACCAGACCA 89248
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| | || || | || || || ||| |||| |||| | ||||| ||||||||
Sbjct 89247 GCAGAGACTTATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCCTTTCAGACTACAA 89188
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| ||||| | || || || ||||||||
Sbjct 89187 CATCCAGAAGGAGTCCACCCTCCACTTGGTGCT 89155
>seq3
Length=1705961
Score = 125 bits (138), Expect = 7e-24
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| ||||| || || || || || |||||| |||| || ||| |
Sbjct 1462627 AAGATGCAGATTTTCGTTAAAACCCTTACCGGAAAGACGATCACCCTCGAGGTTGAGTCT 1462686
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | |||| | || | || |||| ||||| |||||||| || | ||
Sbjct 1462687 TCCGACACCATTGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCACCTGA 1462745
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||| | || || | ||| || || ||| |||| |||| || ||||| |||||
Sbjct 1462746 CCAGCAGAGACTTATCTTCGCTGGTAAGCAGTTGGAGGACGGCCGTACCCTTTCGGACTA 1462805
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||| ||||| |||| || || ||||| ||| | ||||||| ||
Sbjct 1462806 CAACATCCAGAAGGAGTCGACTCTCCACTTGGTTCTGAGACTGAGAGGTGG 1462856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172706217600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |