Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 3e-16
seq3 84.2 9e-11
>seq4
Length=1514682
Score = 102 bits (112), Expect = 3e-16
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || |||||||||| || || |||||||| || || || ||
Sbjct 88910 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACAATCACTCTTGAAGTGGAGTCCTCC 88851
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || | || || || || || ||||||||||| || || || || ||
Sbjct 88850 GACACCATCGATAACGTCAAGCAGAAGATCCAGGATAAGGAAGGTATCCCACCAGACCAG 88791
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||| | || ||| | || || || | || ||||| ||||| | | || || ||
Sbjct 88790 CAACGTCTTATCTTCGCCGGTAAGCAGTTGGAGGATGGCAGAACCCTTTCAGACTACAAC 88731
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | ||||| ||||| || | ||||| |||||
Sbjct 88730 ATCCAGAAGGAATCTACACTCCACTTGGTCCTTAGACTTAGAGG 88687
Score = 102 bits (112), Expect = 3e-16
Identities = 171/246 (70%), Gaps = 1/246 (0%)
Strand=Plus/Minus
Query 391028 AGAAACAATATATTATATTATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTAT 391087
|||| |||| || ||| || ||| | || ||||| || || || || ||||| || ||
Sbjct 89615 AGAACCAAT-TAGTATTAAATCATGCAGATCTTCGTCAAGACCCTCACAGGTAAGACCAT 89557
Query 391088 TACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAA 391147
|| || || ||||| || || || | |||||| | || ||||| || || |||||
Sbjct 89556 CACACTCGAGGTTGAGTCCTCAGACACCATTGACAACGTCAAGCAAAAGATCCAGGATAA 89497
Query 391148 GGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207
|||||| || || || || || |||||| | || || | || || || | || |||||
Sbjct 89496 GGAAGGTATCCCACCAGACCAGCAACGTCTTATCTTTGCCGGTAAGCAGTTGGAGGATGG 89437
Query 391208 AAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||||| | | ||||| || || | ||||| | || || ||||| || | ||| |
Sbjct 89436 CAGAACCCTTTCCGATTACAACATCCAAAAGGAGTCTACGCTCCACTTGGTTCTCAGATT 89377
Query 391268 GAGAGG 391273
||||||
Sbjct 89376 GAGAGG 89371
Score = 102 bits (112), Expect = 3e-16
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || ||||| ||||| || || || || || || || || ||
Sbjct 1333429 ATGCAGATTTTCGTCAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCC 1333488
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | || || || || || || ||||| ||||||||||| || ||
Sbjct 1333489 GACACCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGAATTCCTCCAGACCAG 1333548
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | | || ||| | || || || || || || || |||||| | | || || ||
Sbjct 1333549 CAGAGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACTACAAC 1333608
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
||| | ||||| | || || ||||| || | |||||||||||
Sbjct 1333609 ATTCAGAAGGAGTCCACCCTCCACTTGGTCCTTAGACTGAGAGG 1333652
Score = 98.7 bits (108), Expect = 4e-15
Identities = 156/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || || |||||||| ||||| || || || || ||||| ||
Sbjct 89138 ATGCAGATCTTCGTCAAGACTCTTACTGGTAAGACTATCACGCTCGAGGTCGAATCTTCG 89079
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | | || || || || |||||||||||||| || || || || ||
Sbjct 89078 GACACCATTGACAATGTCAAGCAGAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAG 89019
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||| | || || | || || || | || ||||| | || | | || || ||
Sbjct 89018 CAACGTCTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGGACCCTTTCTGACTACAAC 88959
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
||| | || || | || || ||||| || | ||| |||||||
Sbjct 88958 ATTCAGAAAGAATCCACTCTCCACTTGGTTCTCAGATTGAGAGG 88915
>seq3
Length=1705961
Score = 84.2 bits (92), Expect = 9e-11
Identities = 153/224 (68%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||||||||| || || || || || || || || || ||||| || ||
Sbjct 1462630 ATGCAGATTTTCGTTAAAACCCTTACCGGAAAGACGATCACCCTCGAGGTTGAGTCTTCC 1462689
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | || || || || || || ||||| ||||| || ||||| ||
Sbjct 1462690 GACACCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCACCTGACCAG 1462749
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | | || ||| | || || || | || || || | || | |||| || ||
Sbjct 1462750 CAGAGACTTATCTTCGCTGGTAAGCAGTTGGAGGACGGCCGTACCCTTTCGGACTACAAC 1462809
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || || ||||| || | |||||||||||
Sbjct 1462810 ATCCAGAAGGAGTCGACTCTCCACTTGGTTCTGAGACTGAGAGG 1462853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975718020291620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |