Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq1 251 5e-61
seq2 93.3 3e-13
>seq1
Length=2842153
Score = 251 bits (278), Expect = 5e-61
Identities = 952/1478 (64%), Gaps = 22/1478 (1%)
Strand=Plus/Plus
Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309
|| ||| |||| | || || | || || ||||| || | || || ||||| |||||
Sbjct 281522 TTCTCAACGGCGGAAACGTTCAAGATTCCGTTGGCGTCAATGTCGAAGGTGACCTCAATC 281581
Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369
||||| || ||||| | || |||||||| || | | ||| | || || ||
Sbjct 281582 TGAGGAACACCTCTTGGGGCTGGTGGGATTCCAGTAAGCTCAAACTTACCAAGCAAGTTG 281641
Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429
|| || || || ||| ||||||||||| | || || || | | || ||
Sbjct 281642 TTGTCCTTGGTTCTAGTTCTCTCACCCTCGAAGACCTGAATCAAGACACCTGGCTGGTTG 281701
Query 517430 TCTGAATAAGTTGTAAATA-CTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 517488
|| | || || | || | ||||| | || || || || || || | |||||| ||
Sbjct 281702 TCAGCGTAGGTAGAGAAGATCTCTG-ACTTCTTGCATGGGATAGTAGAGTTTCTTGGGAT 281760
Query 517489 AATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 517548
| |||||||| | |||||| || || || | ||| ||||| || |||||||||||||
Sbjct 281761 GAGCTTGGTCATGACACCACCAGCAGTCTCGATACCGAGAGAGAGTGGAGTGACATCAAG 281820
Query 517549 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 517608
| || | | || || ||| || | |||| ||||| || || || | ||
Sbjct 281821 CAAGAGCAAGTCCTGGGTCTTCTCAGAGGTGTCACCAGAGAGAATGGCAGCCTGGACGGC 281880
Query 517609 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 517668
|||||| || || || || |||||||| || | | | || | | || || |||
Sbjct 281881 AGCACCGTAGGCGACGGCCTCATCAGGGTTGATGGACTTGTTCGGCTCCTTTCCGGAGAA 281940
Query 517669 AAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 517727
|| | || || | ||| |||||||| ||||| | || |||||||| | || |
Sbjct 281941 GAAGTCGCTAACGAGCT-TCTGGACCTTAGGGATACGGGTAGAACCTCCAACGAGGACGA 281999
Query 517728 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 517787
| |||| ||||| || || |||| || || || | ||| || || || || | |
Sbjct 282000 TCTCATCGACCTGAGACTTGTCCAACTTGGAGTCTCTGAGAACCTTCTCGACTGGAGCGA 282059
Query 517788 GACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 517847
|| | ||| || | ||| | || || || |||||| | ||||| || | || |
Sbjct 282060 GAGTGGATCTGAAGAGGTCAGCGCAGAGCTCCTCGAATCTGGCTCTGGTGATAGA-AGTG 282118
Query 517848 TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 517906
|| || || || |||||| | | || || | ||||| | || || || || || ||
Sbjct 282119 TAGAAGTCGATACCTTCGTAGAGGGAGTCGATCTCAATAGAGGTCTGGGTAGAGGAGGAA 282178
Query 517907 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG- 517965
|| | | || || | || || || || || ||||||| | ||| | ||| ||
Sbjct 282179 AGAGTTCTCTTGGCTCTCTCGCAGGCGGTTCTCAGTCTTCTGAGAGCTCT--CTGGTTTC 282236
Query 517966 -ATTCAAATCTGTTTTATATTTTCTCTTGAAATC-TTCAACACACCATGTTACAAGACGA 518023
| | | || | || || |||||||| || || || | | | |||| || | |
Sbjct 282237 CAGTAAGGTCCTTCTTGTACTTTCTCTTAAACTCGTTGGAGA-AGAATGTCACCAATCTG 282295
Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083
|||||||| || ||||||||||| | || | || | || || | || | ||| |
Sbjct 282296 TTATCAAAGTCCTCACCTCCCAAGTGGGTGTCACCAGCGGTGGCCTTCACCTCGAAGATA 282355
Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143
|| || || | ||| | |||| ||||| || || ||||| | ||| || || |
Sbjct 282356 CCTTCGTCGATAGAAAGCAGAGAAACATCGAAAGTACCTCCACCAAGATCGAAGATCAAA 282415
Query 518144 ACATTCATTTCT---TTGTCTTGGT---TTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197
| ||| || || | |||| | || |||||||| || |||| ||||||||
Sbjct 282416 ATGTTCTGCTCGCCCTTAACCTGGTCCTTCTTGTCAAGACCGTAAGCAATGGCAGCAGCG 282475
Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257
|| || |||||||||||||||| || || | |||| || | || || || || ||
Sbjct 282476 GTAGGCTCATTAATAATTCTCATAATGTTCATTCCAGTGATGGTACCGGCGTCCTTGGTA 282535
Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCT 518317
|| ||||| || || ||||| || || || || ||||| | |||||| ||| | || |
Sbjct 282536 GCCTGTCTCTGGGAGTCGTTGAAGTAAGCTGGGACAGTGACAACGGCGTCATTGACCTTC 282595
Query 518318 TTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 518377
| ||| | ||||| || || | ||||| || | || ||| || || || |
Sbjct 282596 TCACCGAGGTAAGCCTCAGCAGTCTCCTTCATCTTGGAGAGAACCATAGACGAGATCTCC 282655
Query 518378 TCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCA 518437
|| |||| | ||||| ||| | || || | || | ||| || ||||
Sbjct 282656 TCAGGGGTGAAAACCTTGGTCTCACCCTTGTACTCGACCTGAATCTTTGGCTTTCCACCA 282715
Query 518438 ACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG--TCATTAA 518495
|| | | || || || ||||||| |||||||| || |||| | || | |
Sbjct 282716 ACGTCGACCACCTTGAAAGGCCAGTGCTTCATATCGCCCTG--GACTTCAGCATCGCTGA 282773
Query 518496 AATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTT 518555
| | ||||||||| | || || |||||||| | ||| ||||| || || || ||||| |
Sbjct 282774 ACTTTCTACCAATGAGTCTCTTGGCATCAAAGACAGTGTTGGTAGGGTTCATGGCAGCCT 282833
Query 518556 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 518615
| | ||||| || || || |||||| | || | || || |||| || || ||||| |
Sbjct 282834 GGTTCTTGGCGGCCTCACCGATCAGACGCTCGCTGTCAGTGAATGCCACGTAAGATGGCG 282893
Query 518616 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 518675
| || | ||| ||||| ||||| |||| ||| ||||| | | | ||| | ||||| |
Sbjct 282894 TAGTTCTATTTCCTTGGTCATTTGCAACAATCTCAACCCTCTCTTGTTGGAAGACACCAA 282953
Query 518676 CACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713
| ||| | || ||||| | |||||| || ||||||
Sbjct 282954 CGCAAGAGTATGTGGTTCCGAGATCAATTCCGATAGCA 282991
>seq2
Length=2777425
Score = 93.3 bits (102), Expect = 3e-13
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227
|| |||||||| || || | |||||||| || || || || | ||||| | ||| ||
Sbjct 207319 TTGTCAAGACCGTAGGCGATGGCAGCAGCGGTAGGCTCGTTGACGATTCTAAGAACGTTC 207260
Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287
| || ||||| | || ||||| || ||||| ||||| || | ||||| || ||||||
Sbjct 207259 AATCCGGCAATGGTACCGGCATCCTTGGTGGCCTGTCTCTGGGCGTCGTTGAAGTATGCA 207200
Query 518288 GGAACAGTAATAACGGCATCAGTTA-CTTCTTTACCAATATAAGCGCTTGCCGTTTGTTT 518346
|||||||| | || || | || | ||||||| || | || | || | || ||
Sbjct 207199 GGAACAGTGACCACAGCGTGTGTCACCTTCTTT-CCGAGGTAGTCCTCGGCAATCTGCTT 207141
Query 518347 CATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGG 518396
||| |||| ||||||| | || ||||| || || | || |||||||
Sbjct 207140 CATCTTACCCAAAATCAAGGCCGAGATTTGCTCCGGAGTGTACTGCTTGG 207091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780821655650590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |