Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1 251 5e-61 seq2 93.3 3e-13 >seq1 Length=2842153 Score = 251 bits (278), Expect = 5e-61 Identities = 952/1478 (64%), Gaps = 22/1478 (1%) Strand=Plus/Plus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 || ||| |||| | || || | || || ||||| || | || || ||||| ||||| Sbjct 281522 TTCTCAACGGCGGAAACGTTCAAGATTCCGTTGGCGTCAATGTCGAAGGTGACCTCAATC 281581 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 517369 ||||| || ||||| | || |||||||| || | | ||| | || || || Sbjct 281582 TGAGGAACACCTCTTGGGGCTGGTGGGATTCCAGTAAGCTCAAACTTACCAAGCAAGTTG 281641 Query 517370 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 517429 || || || || ||| ||||||||||| | || || || | | || || Sbjct 281642 TTGTCCTTGGTTCTAGTTCTCTCACCCTCGAAGACCTGAATCAAGACACCTGGCTGGTTG 281701 Query 517430 TCTGAATAAGTTGTAAATA-CTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAAT 517488 || | || || | || | ||||| | || || || || || || | |||||| || Sbjct 281702 TCAGCGTAGGTAGAGAAGATCTCTG-ACTTCTTGCATGGGATAGTAGAGTTTCTTGGGAT 281760 Query 517489 AATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 517548 | |||||||| | |||||| || || || | ||| ||||| || ||||||||||||| Sbjct 281761 GAGCTTGGTCATGACACCACCAGCAGTCTCGATACCGAGAGAGAGTGGAGTGACATCAAG 281820 Query 517549 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 517608 | || | | || || ||| || | |||| ||||| || || || | || Sbjct 281821 CAAGAGCAAGTCCTGGGTCTTCTCAGAGGTGTCACCAGAGAGAATGGCAGCCTGGACGGC 281880 Query 517609 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 517668 |||||| || || || || |||||||| || | | | || | | || || ||| Sbjct 281881 AGCACCGTAGGCGACGGCCTCATCAGGGTTGATGGACTTGTTCGGCTCCTTTCCGGAGAA 281940 Query 517669 AAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 517727 || | || || | ||| |||||||| ||||| | || |||||||| | || | Sbjct 281941 GAAGTCGCTAACGAGCT-TCTGGACCTTAGGGATACGGGTAGAACCTCCAACGAGGACGA 281999 Query 517728 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 517787 | |||| ||||| || || |||| || || || | ||| || || || || | | Sbjct 282000 TCTCATCGACCTGAGACTTGTCCAACTTGGAGTCTCTGAGAACCTTCTCGACTGGAGCGA 282059 Query 517788 GACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 517847 || | ||| || | ||| | || || || |||||| | ||||| || | || | Sbjct 282060 GAGTGGATCTGAAGAGGTCAGCGCAGAGCTCCTCGAATCTGGCTCTGGTGATAGA-AGTG 282118 Query 517848 TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 517906 || || || || |||||| | | || || | ||||| | || || || || || || Sbjct 282119 TAGAAGTCGATACCTTCGTAGAGGGAGTCGATCTCAATAGAGGTCTGGGTAGAGGAGGAA 282178 Query 517907 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG- 517965 || | | || || | || || || || || ||||||| | ||| | ||| || Sbjct 282179 AGAGTTCTCTTGGCTCTCTCGCAGGCGGTTCTCAGTCTTCTGAGAGCTCT--CTGGTTTC 282236 Query 517966 -ATTCAAATCTGTTTTATATTTTCTCTTGAAATC-TTCAACACACCATGTTACAAGACGA 518023 | | | || | || || |||||||| || || || | | | |||| || | | Sbjct 282237 CAGTAAGGTCCTTCTTGTACTTTCTCTTAAACTCGTTGGAGA-AGAATGTCACCAATCTG 282295 Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 |||||||| || ||||||||||| | || | || | || || | || | ||| | Sbjct 282296 TTATCAAAGTCCTCACCTCCCAAGTGGGTGTCACCAGCGGTGGCCTTCACCTCGAAGATA 282355 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 || || || | ||| | |||| ||||| || || ||||| | ||| || || | Sbjct 282356 CCTTCGTCGATAGAAAGCAGAGAAACATCGAAAGTACCTCCACCAAGATCGAAGATCAAA 282415 Query 518144 ACATTCATTTCT---TTGTCTTGGT---TTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197 | ||| || || | |||| | || |||||||| || |||| |||||||| Sbjct 282416 ATGTTCTGCTCGCCCTTAACCTGGTCCTTCTTGTCAAGACCGTAAGCAATGGCAGCAGCG 282475 Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257 || || |||||||||||||||| || || | |||| || | || || || || || Sbjct 282476 GTAGGCTCATTAATAATTCTCATAATGTTCATTCCAGTGATGGTACCGGCGTCCTTGGTA 282535 Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCT 518317 || ||||| || || ||||| || || || || ||||| | |||||| ||| | || | Sbjct 282536 GCCTGTCTCTGGGAGTCGTTGAAGTAAGCTGGGACAGTGACAACGGCGTCATTGACCTTC 282595 Query 518318 TTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 518377 | ||| | ||||| || || | ||||| || | || ||| || || || | Sbjct 282596 TCACCGAGGTAAGCCTCAGCAGTCTCCTTCATCTTGGAGAGAACCATAGACGAGATCTCC 282655 Query 518378 TCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCA 518437 || |||| | ||||| ||| | || || | || | ||| || |||| Sbjct 282656 TCAGGGGTGAAAACCTTGGTCTCACCCTTGTACTCGACCTGAATCTTTGGCTTTCCACCA 282715 Query 518438 ACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG--TCATTAA 518495 || | | || || || ||||||| |||||||| || |||| | || | | Sbjct 282716 ACGTCGACCACCTTGAAAGGCCAGTGCTTCATATCGCCCTG--GACTTCAGCATCGCTGA 282773 Query 518496 AATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTT 518555 | | ||||||||| | || || |||||||| | ||| ||||| || || || ||||| | Sbjct 282774 ACTTTCTACCAATGAGTCTCTTGGCATCAAAGACAGTGTTGGTAGGGTTCATGGCAGCCT 282833 Query 518556 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 518615 | | ||||| || || || |||||| | || | || || |||| || || ||||| | Sbjct 282834 GGTTCTTGGCGGCCTCACCGATCAGACGCTCGCTGTCAGTGAATGCCACGTAAGATGGCG 282893 Query 518616 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 518675 | || | ||| ||||| ||||| |||| ||| ||||| | | | ||| | ||||| | Sbjct 282894 TAGTTCTATTTCCTTGGTCATTTGCAACAATCTCAACCCTCTCTTGTTGGAAGACACCAA 282953 Query 518676 CACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713 | ||| | || ||||| | |||||| || |||||| Sbjct 282954 CGCAAGAGTATGTGGTTCCGAGATCAATTCCGATAGCA 282991 >seq2 Length=2777425 Score = 93.3 bits (102), Expect = 3e-13 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || |||||||| || || | |||||||| || || || || | ||||| | ||| || Sbjct 207319 TTGTCAAGACCGTAGGCGATGGCAGCAGCGGTAGGCTCGTTGACGATTCTAAGAACGTTC 207260 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | || ||||| | || ||||| || ||||| ||||| || | ||||| || |||||| Sbjct 207259 AATCCGGCAATGGTACCGGCATCCTTGGTGGCCTGTCTCTGGGCGTCGTTGAAGTATGCA 207200 Query 518288 GGAACAGTAATAACGGCATCAGTTA-CTTCTTTACCAATATAAGCGCTTGCCGTTTGTTT 518346 |||||||| | || || | || | ||||||| || | || | || | || || Sbjct 207199 GGAACAGTGACCACAGCGTGTGTCACCTTCTTT-CCGAGGTAGTCCTCGGCAATCTGCTT 207141 Query 518347 CATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGG 518396 ||| |||| ||||||| | || ||||| || || | || ||||||| Sbjct 207140 CATCTTACCCAAAATCAAGGCCGAGATTTGCTCCGGAGTGTACTGCTTGG 207091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821655650590