Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 417 1e-111 seq4 168 8e-37 seq2 120 4e-22 >seq1 Length=2842153 Score = 417 bits (462), Expect = 1e-111 Identities = 1064/1602 (66%), Gaps = 44/1602 (3%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| ||| | || ||||| || || || |||||| | || || || || || || Sbjct 281411 TCATCCTCAGCCTTGTACTTCTCAGCCTCAGAGACCATTCTGTCGATCTCGTCCTTAGAG 281470 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | ||| ||||| || || || ||||| ||||| | || ||||| | |||| || | Sbjct 281471 AGTCTACCCTTGTCGTTGGTGATCGTGATCTTCTGGGTCTTACCAGTACCCTTCTCAACG 281530 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || ||||| || || || || |||| ||||| | || | ||| || || | Sbjct 281531 GCGGAAACGTTCAAGATTCCGTTGGCGTCAATGTCGAAGGTGACCTCAATCTGAGGAACA 281590 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || || || || | ||| || || || | ||||| ||||||| || |||| ||| | Sbjct 281591 CCTCTTGGGGCTGGTGGGATTCCAGTAAGCTCAAACTTACCAAGCAAGTTGTTGTCCTTG 281650 Query 6809 GCCTTCT--TACGTTCACCTTCATAGACTTTAATT--GTCACC--GCAGGTTGATTATCT 6862 | |||| | | ||||| || |||| | ||| | |||| || ||||| | | | Sbjct 281651 G--TTCTAGTTCTCTCACCCTCGAAGACCTGAATCAAGACACCTGGCTGGTTG-TCAGCG 281707 Query 6863 TGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACC 6922 | | | |||||||| | | ||||| |||| || || | ||||| || || | | Sbjct 281708 TAGG---TAGAGAAGATCTCTGACTTCTTGCATGGGATAGTAGAGTTTCTTGGGATGAGC 281764 Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTC---CAAG 6979 |||||| | |||||| ||| |||| || ||||| || || || || || |||| Sbjct 281765 TTGGTCATGACACCACCAGCAGTCTCGATACCGAGAGAGAGTGGAGTGACATCAAGCAAG 281824 Query 6980 AGTAACA----GGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGAC 7035 || || |||||| |||| || |||| | | ||||| || ||||| Sbjct 281825 AGCAAGTCCTGGGTCTTCT-CAGAGGTGT------CACCAGAGAGAATGGCAGCCTGGAC 281877 Query 7036 CGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTT 7095 | || ||||| ||||| |||||||| ||||| || | || ||| | || || ||| Sbjct 281878 GGCAGCACCGTAGGCGACGGCCTCATCAGGGTTGATGGACTTGTTCGGCTCCTTTCCGG- 281936 Query 7096 AAAATAATCCGATAAC-ATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAA 7154 | || || || |||| | | || | || ||||| || || || || || || | | Sbjct 281937 AGAAGAAGTCGCTAACGAGCTTCTGGACCTTAGGGATACGGGTAGAACCTCCAACGAGGA 281996 Query 7155 CGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTT 7214 |||| |||| || | || || || | ||| ||||||| || || ||||| || Sbjct 281997 CGATCTCATCGACCTGAGACTTGTCCAACTTGGAGTCTCTGAGAACCTTCTCGACTGGAG 282056 Query 7215 CCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATG 7274 | | | | ||| | ||| || || ||||| || | || | ||| || || | Sbjct 282057 CGAGAGTGGATCTGAAGAGGTCAGCGCAGAGCTCCTCGAATCTGGCTCTGGTGATAGAAG 282116 Query 7275 TATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAG 7334 | ||||| || | || ||||| | || || || ||||| | || || | | || | Sbjct 282117 TGTAGAAGTCGATACCTTCGTAGAGGGAGTCGATCTCAATAGAGGTCTGGGTAGAGGAGG 282176 Query 7335 ATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTAC 7394 | | |||| ||| || | ||| || || |||| | | | || || | | |||| | Sbjct 282177 AAAGAGTTCTCTTGGCTCTCTCGCAGGCGGTTCTCAGTCTTCTGAGAGCTCTCTGGTTTC 282236 Query 7395 CGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAG--TGTCGAAGGAGTCT 7452 | | || || ||||| | || | |||||||| | |||||| |||| | | ||| Sbjct 282237 CAGTAAGGTCCTTCTTGTACTTTCTCTTAAACTCGTTGGAGAAGAATGTC--ACCAATCT 282294 Query 7453 CGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGAT 7512 ||| || || ||||| |||||||| || || || ||||| || || || || ||||| Sbjct 282295 GTTATCAAAGTCCTCACCTCCCAAGTGGGTGTCACCAGCGGTGGCCTTCACCTCGAAGAT 282354 Query 7513 ACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 |||| | || || | || |||||||| || ||||| ||||| || || || || | Sbjct 282355 ACCTTCGTCGATAGAAAGCAGAGAAACATCGAAAGTACCTCCACCAAGATCGAAGATCAA 282414 Query 7573 TACGTTCGTATCGTCGT----CT--TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGC 7626 | |||| ||| | | || | ||||| || |||||||| || || || || || Sbjct 282415 AATGTTCTGCTCGCCCTTAACCTGGTCCTTCTTGTCAAGACCGTAAGCAATGGCAGCAGC 282474 Query 7627 CGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGT 7686 || || ||||||||||| | | | ||||| |||| || || | || || || || Sbjct 282475 GGTAGGCTCATTAATAATTCTCATAATGTTCATTCCAGTGATGGTACCGGCGTCCTTGGT 282534 Query 7687 CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTT 7746 || |||| || || ||||| ||||| || ||||| || || || ||||| |||| || Sbjct 282535 AGCCTGTCTCTGGGAGTCGTTGAAGTAAGCTGGGACAGTGACAACGGCGTCATTGACCTT 282594 Query 7747 CTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 || |||||| || | || || | || ||||| |||| |||||||| || || ||||| Sbjct 282595 CTCACCGAGGTAAGCCTCAGCAGTCTCCTTCATCTTGGAGAGAACCATAGACGAGATCTC 282654 Query 7807 TTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGC 7866 |||| | || || || ||||| || | || || | |||| | || || || | Sbjct 282655 CTCAGGGGTGAAAACCTTGGTCTCACCCTTGTACTCGACCTGAATCTTTGGCTT-TC--C 282711 Query 7867 AGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGA 7926 | || || || ||||| | | ||| | ||||||||| | ||||| | || Sbjct 282712 ACCAACGTCGACCACCTTGAAAGGCCAGTGCTTCATATCGCCCTGGACTTCAGCATCGCT 282771 Query 7927 AAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGT 7986 |||||||| || || || | ||| |||||||| || ||||| | ||||||||||| | Sbjct 282772 GAACTTTCTACCAATGAGTCTCTTGGCATCAAAGACAGTGTTGGTAGGGTTCATGGCAGC 282831 Query 7987 TTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGA 8046 |||||||| || || || ||||| ||||| || | || || || || ||||| || Sbjct 282832 CTGGTTCTTGGCGGCCTCACCGATCAGACGCTC---GCTGTCAGTGAATGCCACGTAAGA 282888 Query 8047 TGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGAC 8106 ||| || |||| ||| |||||||| || |||| ||| || || | || | ||| |||| Sbjct 282889 TGGCGTAGTTCTATTTCCTTGGTCATTTGCAACAATCTCAACCCTCTCTTGTTGGAAGAC 282948 Query 8107 GCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || ||||| || || || ||||| | |||||| ||||| || Sbjct 282949 ACCAACGCAAGAGTATGTGGTTCCGAGATCAATTCCGATAGC 282990 Score = 122 bits (134), Expect = 1e-22 Identities = 403/621 (65%), Gaps = 23/621 (4%) Strand=Plus/Minus Query 105463 TCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC 105522 |||||| ||||||| ||| ||| ||||| | ||||| || || |||||||| ||| Sbjct 870946 TCGTATCTCTCGTAGAGACGTTCGAACTCGTCTCCGTAGACATCGGAAAGACCTGGGGCC 870887 Query 105523 T--GATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAAT 105580 | ||| ||| | || | | ||| | | || || || || |||||||| | | Sbjct 870886 TCCGAT--GGAGAGAAGAGAGTCCACGTGGAGTTGGCCTCGACACGCTTCATGAAGAGGT 870829 Query 105581 CTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCA 105640 | |||||||||| ||||| || | ||| || | ||| || | ||| || || Sbjct 870828 CAGGAATCCACAGGGCTGGGAACAAGTCACGGGCACGGATCTCCTCCTTACCGTGGTTTT 870769 Query 105641 AACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAG 105700 ||| || ||| | |||| || || ||||||||||| || | |||| || || | Sbjct 870768 TACGGATGTCGGTGAGGTCGAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGG 870709 Query 105701 -ACC------CTT--TACGACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACA 105751 ||| ||| ||| || |||| | || || | || || ||| | | Sbjct 870708 CACCAGGTCTCTTGTTACCAC------CTTGGTCCACGTAACGGGCCGTGTTGTTGAAGA 870655 Query 105752 CTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTAT 105811 | || | ||||||||| ||||| | ||| || || || || || ||| | || | Sbjct 870654 CACGGACCATTGGAATGATACCGTTGGAAGTACCGTTGGTACCGGCAATGTAAGAGCCAG 870595 Query 105812 TTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCAC 105871 | ||||| | | ||| | ||| || || || || || || ||| ||| | |||| Sbjct 870594 TGGCACGGATGTTGTGGATGTGCAAACCGATTCCACCGGCGGTCTTGGAGATGAGAGCAC 870535 Query 105872 ACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAAC 105931 ||| || | |||||||| ||||| ||||| || ||||| | |||| || ||| | Sbjct 870534 ACTGCTTCAAAGTATCGTAGATACCTTCGATGGAGTCCTCCTTCATGGCAACCAAGAAGC 870475 Query 105932 ACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGA 105991 | || |||||||| || | || ||||| || |||||||||||||| | || || ||| Sbjct 870474 AAGACGACATTTGAGGACGTGGAGTACCGGCGTTGAACAGAGTTGGCGAAGCGTGCGTGA 870415 Query 105992 ACAAACCTTTCGATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCC--ATG 106049 | ||| | ||| | | ||| || || ||||| | ||||| | ||||| || Sbjct 870414 AGTAACGCTCCGACATGAGGTTGTAAGTCTCGAGGACTTTTTCAATGT--TGTCCGAGTG 870357 Query 106050 AATACCAATAGCGACGCGCAT 106070 | |||||| || || | ||| Sbjct 870356 GACACCAATGGCAACTCTCAT 870336 >seq4 Length=1514682 Score = 168 bits (186), Expect = 8e-37 Identities = 464/702 (66%), Gaps = 18/702 (3%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| || || | ||||||||||| || || || ||||| || ||||| |||| ||| Sbjct 258998 ATCAAAGTCCTGTCCACCCAAGTGAGTGTCACCAGCGGTGGCCTTGACAGTGAAGACACC 259057 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || | ||||| || | || ||||| || ||||| ||||| || || || || || | Sbjct 259058 ACCCTTGATGTTCAAGAGGGAGACATCGAAAGTACCTCCACCGAGATCGAAGATCAGGAT 259117 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTA------TCGAGACCGTACGCGATAGCCGCCGCCGT 7629 || || || || | | | |||| |||||||||| |||||||| || || || Sbjct 259118 GT--GTCTC-TCCTTCTCGGACTTACCAGAGCCGAGACCGTAGGCGATAGCGGCGGCGGT 259174 Query 7630 TGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 ||| || || || || | | | ||| || |||| ||| | | || || || || || Sbjct 259175 TGGCTCGTTGATGATTCTCAAAACGTTGAGACCAGAAATGGCACCGGCGTCCTTGGTGGC 259234 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 |||| || | ||||| |||||||| || || || | ||| | | | |||| || Sbjct 259235 CTGTCTCTGAGCGTCGTTGAAGTAGGCTGGCACGGTAATGACAGACTTCTCGACTGGCTG 259294 Query 7750 ACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 |||| | | || ||| | || ||||| ||||| | ||||||||| || ||||| | Sbjct 259295 GCCGATCTTGGCCTCGGCGGTCTCCTTCATCTTGGTCAAAACCATCGAGGAGATCTCCTG 259354 Query 7810 AGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGC 7869 | | || || || || ||| | || || | ||| | || || || |||| Sbjct 259355 TGGAGAGAAGGTCTTGGTCTCTCCGAGGTACTCGACCTGGATCTTTGGGTT-TC--CAGC 259411 Query 7870 ACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAA 7929 || |||||||| | | |||| ||||| || | |||| | | || | || Sbjct 259412 CTCGTCAATAACCTTGAAAGGCCAAGTCTTCATGTCCTTCTGGATGTTCTCATCAGCGAA 259471 Query 7930 CTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTG 7989 | || || | |||||| || || || || ||||| | ||||||| || | || Sbjct 259472 TCCACGGCCAATCATACGCTTAGCGTCGAACACAGTGTTGGTTGGGTTCAAAGCGGCCTG 259531 Query 7990 GTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGG 8049 |||||| || || || |||| || | || | | | || || ||||| |||||||| Sbjct 259532 GTTCTTGGCAGCATCTCCGACGAGTC--TC-TCCTCTGGAGTGAAAGCGACATACGATGG 259588 Query 8050 GGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTC-GTTTTGCC--AGAC 8106 || |||| || ||||| ||||| ||||| ||||| || | | || ||| | |||| Sbjct 259589 AGTGGTTCTGTTACCTTGCTCGTTAGCAATGATTTCCACACCTCCGGTCTTGTCATAGAC 259648 Query 8107 GCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 | | || ||||| ||||| ||||| | ||| ||||| || || Sbjct 259649 GGCAACACACGAGTACGTGGTTCCGAGATCGATACCAATAGC 259690 >seq2 Length=2777425 Score = 120 bits (132), Expect = 4e-22 Identities = 449/694 (65%), Gaps = 19/694 (3%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| | || |||||| ||| Sbjct 207457 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCAGCGGTAGAAAGCACCTCAAAGGCACCA 207398 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || |||| | ||| || ||||| ||||| || ||||| || ||| | | || | Sbjct 207397 CCAGCAATAGAAAGCAAAGACACATCGAACGTTCCTCCACCAAGATCATACACGACAATC 207338 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | | || || || ||| || |||||||| ||||| || || || || || || Sbjct 207337 TGCTTCTCCTCCTC---ACCCTTGTCAAGACCGTAGGCGATGGCAGCAGCGGTAGGCTCG 207281 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | || | |||| ||||| || ||||| || | ||||| || || || |||| Sbjct 207280 TTGACGATTCTAAGAACGTTCAATCCGGCAATGGTACCGGCATCCTTGGTGGCCTGTCTC 207221 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| ||||| || || || || || || |||| || || ||||| ||||| Sbjct 207220 TGGGCGTCGTTGAAGTATGCAGGAACAGTGACCACAGCGTGTGTCACCTTCTTTCCGAGG 207161 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || || | ||||| || | || || | || || | || | | Sbjct 207160 TAGTCCTCGGCAATCTGCTTCATCTTACCCAAAATCAAGGCCGAGATTTGCTCCGGAGTG 207101 Query 7817 AACTGTTTCGTTTCACCGTTAA-AATCAACTTCA-ATCATGGGTT-TATCCGCAGCACCG 7873 |||| || || || ||| ||| | || || || | || | || ||||| || | Sbjct 207100 TACTGCTTGGTCTCGCCGCTAACAGACACCTCCACAACAGGTCTTCCATCCG-AGTTC-- 207044 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTC--CGAAAACT 7931 | |||||| || | | | || || || |||| | | ||| ||||| Sbjct 207043 ---ACAACCTTGTAAGGCAGACGCTTGATCTCACGCTGGATCACCTTGTCTTCGAAACGG 206987 Query 7932 TTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGT 7991 | || ||||||||||| || | | |||||| |||| ||| | || |||| Sbjct 206986 T--GGCCCATAAGACGCTTAATGTCGTAGATTGTGTTATTGGTGTTGGAAGGTGCCTGGT 206929 Query 7992 TCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGG 8051 |||| || || || || | ||| | || | | ||||| ||||| ||||||||||| | Sbjct 206928 TCTTGGCAGCATCTCCAACAAGTC--TC-TCCTCGTCCGTGAACGCCACGTACGATGGCG 206872 Query 8052 TCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGA 8111 | | || || ||||||||||| || | || || || | | | | | || |||| Sbjct 206871 TTATACGGTTACCTTGGTCGTTAGCCAAGATCTCCACTCTGCCACCCTTCATCACACCGA 206812 Query 8112 CGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 | ||||| || || || || | ||| |||||||| Sbjct 206811 CACACGAGTAGGTGGTACCAAGATCGATACCGAT 206778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132680912600