Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1 244 1e-59
seq4 100 4e-16
seq2 82.4 9e-11
>seq1
Length=2842153
Score = 244 bits (270), Expect = 1e-59
Identities = 1122/1758 (64%), Gaps = 59/1758 (3%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||| | || || || ||| |||| ||| | ||||| ||
Sbjct 870321 CCTCAGCACATGATCATGAGAGTTGCCATTGGTGTCCACTCGGACAACATTGAAAAAGTC 870380
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731
| ||||| ||| || ||||| || |||| ||||| | ||||| || |||
Sbjct 870381 CTCGAGACTTACAACCTCATGTCGGAGCGTTACTTCACGCACGCTTCGCCAACTCTGTTC 870440
Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791
||||| ||||| ||| | || |||||||| ||| ||| | |||| | ||||||||
Sbjct 870441 AACGCCGGTACTCCACGTCCTCAAATGTCGTCTTGCTTCTTGGTTGCCATGAAGGAGGAC 870500
Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851
|| ||| | || || |||| ||| | | | ||||| | ||||| ||| || |||
Sbjct 870501 TCCATCGAAGGTATCTACGATACTTTGAAGCAGTGTGCTCTCATCTCCAAGACCGCCGGT 870560
Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAAT 111911
|| ||||| |||||||||| | || | |||| ||| ||| ||||| ||
Sbjct 870561 GGAATCGGTTTGCACATCCACAACATCCGTGCCACTGGCTCTTACATTGCCGGTACCAAC 870620
Query 111912 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 111971
||| || | ||||| ||||||||| | || || || ||| ||| || || || ||
Sbjct 870621 GGTACTTCCAACGGTATCATTCCAATGGTCCGTGTCTTCAACAACACGGCCCGTTACGTG 870680
Query 111972 AACCAAGCTGGGCGTCGCAAGGGATCT------ATCGCAGTCTATCTTGAGCCATGGCAC 112025
|||||| ||| | |||| || || ||||| |||| || ||||||||||||
Sbjct 870681 GACCAAGGTGG---TAACAAGAGACCTGGTGCCATCGCCATCTACCTCGAGCCATGGCAC 870737
Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC 112085
|| || ||| | || || || | ||| ||||| ||| | |||||| || |
Sbjct 870738 GCTGACATCTTCGACCTCACCGACATCCGTAAAAACCACGGTAAGGAGGAGATCCGTGCC 870797
Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145
|| || | ||| | || || |||||||| || |||||||||||| | || |||| |
Sbjct 870798 CGTGACTTGTTCCCAGCCCTGTGGATTCCTGACCTCTTCATGAAGCGTGTCGAGGCCAAC 870857
Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAG 112205
|| ||| ||||||| | |||| |||| || ||||| ||||||| | || ||
Sbjct 870858 TCCACGTGGACTCTCTTCTCTCCATCGGAGGCCCCAGGTCTTTCCGATGTCTACGGAGAC 870917
Query 112206 GAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCA 112265
||||| ||| |||||| | |||||| || | || | || ||| || |||
Sbjct 870918 GAGTTCGAACGTCTCTACGAGAGATACGAGCGCGAGGGACGTG-GA---AGAC-GTACCA 870972
Query 112266 GC--TGCC--GATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320
| ||| || | ||||| | || | || | || |||||||||||||| ||||
Sbjct 870973 TCAAGGCCCAGAAGCTGTGGTACCACATCTTGGAGGCCCAGACCGAGACTGGTACTCCAT 871032
Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380
||| | ||||| ||||| || |||| ||| || || |||| ||||| ||||
Sbjct 871033 TCATGGTCTACAAGGACGCTTGCAACCGCAAGTCCAACCAGCAGAACCTGGGTACCATCA 871092
Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440
|| ||||||| | || || | | || | | ||| || || || |
Sbjct 871093 AGTCTTCCAACTTGTGCTGTGAGGTTGTTGAGTACTCCTCTCCAGAGGAAGTTGCCGTCT 871152
Query 112441 GTAACCTCGCATCAATC-GCTCTCCCCAAGTATGTGGATCCAGAGA---CAAAGACATTT 112496
||||| | || || || ||| | || | ||| || | || | | || | || |
Sbjct 871153 GTAACTTGGCTTCCGTCTGCT-TGCCAGCCTTTGTCGAGCAGGACAACGCCAACAAATCT 871211
Query 112497 ---------GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAAC 112547
| | ||| || | ||| | | | || | | || ||| | |||
Sbjct 871212 TCCTCTTACAACTTTGAGAAGTTGCACCAGATCATCAAGGTTCTTACTCGTAACTTGAAC 871271
Query 112548 AGAGTTATTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACA 112606
| || ||||| | || | ||||| ||| ||| ||||| ||||| |||||| |
Sbjct 871272 TGTGTCATTGACCGGAACTACTACCCAGTTCCAGA-GGCTCGCCGTTCTAACATGAGAAA 871330
Query 112607 CCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGC 112666
| | || ||| ||||||||| |||||| | || || ||| | || || || | |
Sbjct 871331 CAGACCTGTTGCTCTCGGTGTGCAAGGTTTGGCCGACACTTTCTTCCTGTGCCGTCTGCC 871390
Query 112667 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGC 112726
||| || ||| || || || | ||| | || || ||||| || || |||||
Sbjct 871391 ATTCGACTCCCCAGAGGCCCGTGAGTTGAATATCCAGATCTTCGAGACCATCTACCACGC 871450
Query 112727 CGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 112786
||| | ||||| || |||||||| | || ||| || || |||| |||||
Sbjct 871451 AGCTTTGGAGGCTTCGTCCGAGTTGGCCACCGAGGAAGGTGTGTACGAGACCTACGAGGG 871510
Query 112787 TTCTCCAGCTTCACAAGGGGTGCTT-CAATTTGATATGTGGG--AAGGTGAGACCAAGC- 112842
|| ||||| || |||||| ||| || | ||| |||||| || || |||| |
Sbjct 871511 CTCGCCAGCCTC-CAAGGGTATCTTGCAGTACGATCTGTGGGGCAA---GAAGCCAACCG 871566
Query 112843 TTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 112902
|| | |||||||| | | |||| ||| ||| || ||| | ||| |
Sbjct 871567 ATCTGTGGGACTGGGATGAGTTGAAGGCTAAGATCGCCAAGACCGGACTTAGAAACTCGC 871626
Query 112903 TTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 112962
| ||| |||| ||||||||||| || |||||| | || ||| ||||| | || || ||||
Sbjct 871627 TCTTGGTGGCTCCAATGCCAACTGCTTCCACCTCCCAGATCATGGGTTACAACGAGTGCT 871686
Query 112963 TTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTG 113022
| || || ||||| | |||||||| | | ||| ||||| || ||||| ||| |
Sbjct 871687 TCGAGCCATACACTTCCAACATCTACTCGCGTAGAGTGCTCGCCGGTGAGTTCCAGATCG 871746
Query 113023 TCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGG 113082
||||| | | | |||| | || |||| ||||| | | | |||||||
Sbjct 871747 TCAACCCTTACATGCTCCGTGACTTGGTCGACCTTGGAATCTGGGACGATGCTATGAAGA 871806
Query 113083 ATCTCAT----GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAA 113138
| ||| |||| | | ||||| || || | || | ||||||| |||
Sbjct 871807 ACTACATCATCAGTGATAAC----GGTTCGATCCAGCACCTTCCTAACGTTCCAGACGAA 871862
Query 113139 ATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCC 113198
| |||||| | ||| || || ||||| ||| |||| |||| |||||||||
Sbjct 871863 CTCAAGAAGATCTACAAGACCGTGTGGGAGATCTCCCAAAAGGGAATCATCGACATGGCC 871922
Query 113199 GCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAG-- 113254
|| || | ||| || | |||| | |||| ||| ||||| || || |||
Sbjct 871923 GCCGACAGAGGTGCCTACGTTGACC--AGTCCGAGTCGATGAA--CATCCACCTCAAGTC 871978
Query 113255 TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAAC 113314
|||||| ||| ||| || | || |||||| | || ||||||||||||| || || ||
Sbjct 871979 TCCAACCATGGGTAAGATCACCTCGATGCACTTCTATGGTTGGAAGAAGGGCCTTAAGAC 872038
Query 113315 GGGGATGTATTACCTCCG 113332
|| ||||| ||||| ||
Sbjct 872039 TGGTATGTACTACCTGCG 872056
>seq4
Length=1514682
Score = 100 bits (110), Expect = 4e-16
Identities = 109/144 (76%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 102172 CCTTT--GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229
||||| |||||||| || |||| | || | || |||||||||||||| || ||
Sbjct 728875 CCTTTACGCTGAGCGTCTGATCGCCTACGCTGCCATCGAAGGTATCTTCTTCTCAGGATC 728816
Query 102230 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 102289
||| | || | |||||||||||| |||||||||||||||||||| |||||||||
Sbjct 728815 GTTCGCTTCGATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCAGGTCTCACCTTCTCCAA 728756
Query 102290 CGAGCTTATCTCTCGTGACGAGGG 102313
|||||| |||| | || |||||
Sbjct 728755 CGAGCTCATCTGCAGAGATGAGGG 728732
>seq2
Length=2777425
Score = 82.4 bits (90), Expect = 9e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605
|||||| || ||||| ||||| || || ||||| || ||||||||||| | |||||
Sbjct 1644370 CTATGGACGCGTTGCTCCACGTTCGGGACTCGCCGTCAAACACGGTATTGACACCGGTGC 1644311
Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGA 163665
||||| ||||| |||| |||| || || | | ||||||| ||||| || ||
Sbjct 1644310 CGGTGTGATTGACGCCGATTACAGAGGAAAACTGGGAATCGTTCTGTTCAACCACTCCGA 1644251
Query 163666 CAAAGACTTTGAGGTAAAGAGGGGGGAGCGCATCGCACAACTTGTTCTTGAGA 163718
|| ||||||||| | ||| || || || || || || | |||| ||||
Sbjct 1644250 TAAGGACTTTGAGATCAAGCAAGGAGACCGGATTGCCCAGTTGCTTCTCGAGA 1644198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742283610800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |