Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 260 2e-64 >seq1 Length=2842153 Score = 260 bits (288), Expect = 2e-64 Identities = 937/1448 (65%), Gaps = 47/1448 (3%) Strand=Plus/Minus Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954 |||||| ||| ||||| || ||||| ||| | | |||||||| | ||||| || Sbjct 871751 GTTGACGATCTGGAACTCACCGGCGAGCACTCTACGCGAGTAGATGTTGGAAGTGTATGG 871692 Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014 || ||||| || || | ||||| ||| || | |||||| || ||||||||||| |||| Sbjct 871691 CTCGAAGCACTCGTTGTAACCCATGATCTGGGAGGTGGAAGCAGTTGGCATTGGAGCCAC 871632 Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074 ||| || ||| | ||| || | | ||| |||| | |||||||||| | Sbjct 871631 CAAGAGCGAGTTTCTAAGTCCGGTCTTGGCGATCTTAGCCTTCAACTCATCCCAGTCCCA 871572 Query 106075 GTTGAGCTTGGTTT-CACCTT--CCCACATATCAAATTG-AAGCACCCCTTGGGACGTGG 106130 || | |||| | ||| |||||| ||| | || ||| ||||||| | | | Sbjct 871571 C---AGATCGGTTGGCTTCTTGCCCCACAGATCGTACTGCAAGATACCCTTGG-AGGCTG 871516 Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 106190 | || ||||| | ||||| || ||||| | ||||| || | ||||||| Sbjct 871515 GCGAGCCCTCGTAGGTCTCGTACACACCTTCCTCGGTGGCCAACTCGGACGAAGCCTCCA 871456 Query 106191 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 106250 | |||||| || ||||| || ||||| | ||||| ||| ||| || || | Sbjct 871455 AAGCTGCGTGGTAGATGGTCTCGAAGATCTGGATATTCAACTCACGGGCCTCTGGGGAGT 871396 Query 106251 CAAATGCGTAG-CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 106309 | |||| | || ||||||| | || || || | |||||| ||||| | | ||| | Sbjct 871395 CGAATG-GCAGACGGCACAGGAAGAAAGTGTCGGCCAAACCTTGCACACCGAGAGCAACA 871337 Query 106310 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAAT 106368 ||||||| || ||| ||||| || || ||| ||| || || | || | |||||| Sbjct 871336 GGTCTGTTTCTCATGTTAGAACGGCGAGCC-TCTGGAACTGGGTAGTAGTTCCGGTCAAT 871278 Query 106369 GACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA 106428 ||| | ||| | || |||| || ||| |||| | || | || ||| | | | Sbjct 871277 GACACAGTTCAAGTTACGAGTAAGAACCTTGATGATCTGGTGCAACTTCTCAAAGTTGTA 871218 Query 106429 AGTGCGAG------------TCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAA 106476 || | || | || | | |||| | ||| | | || || ||||| Sbjct 871217 AGAGGAAGATTTGTTGGCGTTGTCCTGCTCGACAAAGGCTGGCAAGCAGACGGAAGCCAA 871158 Query 106477 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGA 106536 || || || || || || | | |||||| | || || ||||||||||| Sbjct 871157 GTTACAGACGGCAACTTCCTCTGGAGAGGAGTACTCAACAACCTCACAGCACAAGTTGGA 871098 Query 106537 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAG 106596 | ||| || || |||| |||| ||||| ||| |||||| || |||||||||| Sbjct 871097 AGACTTGATGGTACCCAGGTTCTGCTGGTTGGACTTGCGGTTGCAAGCGTCCTTGTAGAC 871038 Query 106597 CATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGG 106655 |||| | || || || ||||| ||||| | || | || | ||||| | || | | Sbjct 871037 CATGAATGGAGTACCAGTCTCGGTCTGGGCCTCCAAGATGTGGTACCACAGCTTCTGGGC 870978 Query 106656 CTGGTACAATGG--CGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAA 106712 || | |||| ||| || |||||||| |||||| | |||||| ||| | Sbjct 870977 CTTG----ATGGTACGTCTTCCACGTCCCTCGCGCTCGTATCTCTCGTAGAGACGTTCGA 870922 Query 106713 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCA-- 106770 |||| || || | ||||| |||||||| |||| |||| |||| |||| ||| Sbjct 870921 ACTCGTCTCCGTAGACATCGGAAAGACCTGGGGCCTCCGATGGAGAGAAGAGAGTCCACG 870862 Query 106771 TTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 106830 | || | ||| || ||||||||||| ||||| ||||||||||||| || || | Sbjct 870861 TGGAGTTGGC--CTCGACACGCTTCATGAAGAGGTCAGGAATCCACAGGGCTGGGAACAA 870804 Query 106831 ATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGA 106889 || | ||| || | || || | ||| ||||| || | || || || | || Sbjct 870803 GTCACGGGCACGGATC-TCCTCCTTACCGTGGTTTTTACGGATGTCGGTGAGGTCGAAGA 870745 Query 106890 TATCCGCGTGCCATGGCTCAAGATAGACTGCGAT------AGATCCCTTTCGACGCCCAG 106943 | || |||||||||||||| || |||| ||||| || || ||| || || Sbjct 870744 TGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTAC---CAC 870688 Query 106944 CTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTG 107003 |||| | || || || || ||| ||| || || || | ||||||||| ||||| | | Sbjct 870687 CTTGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGG 870628 Query 107004 ATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCC 107063 | ||| || || || ||| ||| | |||| | | | |||||||||| | Sbjct 870627 AAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAAC 870568 Query 107064 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 107123 | || || || || ||| ||||| | ||||||| | | | ||| | |||||||| | Sbjct 870567 CGATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTT 870508 Query 107124 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 107183 ||| ||||||||||| |||| | | ||||||| ||||| || || | ||| |||| Sbjct 870507 CGATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAGTAC 870448 Query 107184 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATG 107243 | || ||||| || ||||| | ||||| |||| || | ||||| || ||| | Sbjct 870447 CGGCGTTGAACAGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTAAG 870388 Query 107244 TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 |||| | ||| ||||||| ||| ||||| || ||||| || | ||| | ||||| Sbjct 870387 TCTCGAGGACTTTTTCAATGTTGTCCGAGTGGACACCAATGGCAACTCTCATGATCATGT 870328 Query 107304 ATTGGGGT 107311 || ||| Sbjct 870327 GCTGAGGT 870320 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 106477 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGA 106536 |||||| || || ||||||| || || ||| || | |||||| ||||| ||||| Sbjct 1668368 ATTGCACACTGCAATCTCATCTTTCGATGAGTATTCGACAATTTCACAACACAGATTGGA 1668427 Query 106537 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAG 106596 |||||| || ||||| ||||||||||| || |||||| ||||||||||| || Sbjct 1668428 CGACTTAATGGTTCCCAAGTTCTTTTGGTTCGATTTCCGGTTGCATGCATCCTTGTAAAG 1668487 Query 106597 CATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACAC 106647 |||| | || || || ||||| ||||| || | ||||| || |||||| Sbjct 1668488 CATGAATGGAGTACCTGTCTCTGTCTGCGAGTATAGAATCTTCTCCCACAC 1668538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980689378600