Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1 260 2e-64
>seq1
Length=2842153
Score = 260 bits (288), Expect = 2e-64
Identities = 937/1448 (65%), Gaps = 47/1448 (3%)
Strand=Plus/Minus
Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954
|||||| ||| ||||| || ||||| ||| | | |||||||| | ||||| ||
Sbjct 871751 GTTGACGATCTGGAACTCACCGGCGAGCACTCTACGCGAGTAGATGTTGGAAGTGTATGG 871692
Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014
|| ||||| || || | ||||| ||| || | |||||| || ||||||||||| ||||
Sbjct 871691 CTCGAAGCACTCGTTGTAACCCATGATCTGGGAGGTGGAAGCAGTTGGCATTGGAGCCAC 871632
Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074
||| || ||| | ||| || | | ||| |||| | |||||||||| |
Sbjct 871631 CAAGAGCGAGTTTCTAAGTCCGGTCTTGGCGATCTTAGCCTTCAACTCATCCCAGTCCCA 871572
Query 106075 GTTGAGCTTGGTTT-CACCTT--CCCACATATCAAATTG-AAGCACCCCTTGGGACGTGG 106130
|| | |||| | ||| |||||| ||| | || ||| ||||||| | | |
Sbjct 871571 C---AGATCGGTTGGCTTCTTGCCCCACAGATCGTACTGCAAGATACCCTTGG-AGGCTG 871516
Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 106190
| || ||||| | ||||| || ||||| | ||||| || | |||||||
Sbjct 871515 GCGAGCCCTCGTAGGTCTCGTACACACCTTCCTCGGTGGCCAACTCGGACGAAGCCTCCA 871456
Query 106191 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 106250
| |||||| || ||||| || ||||| | ||||| ||| ||| || || |
Sbjct 871455 AAGCTGCGTGGTAGATGGTCTCGAAGATCTGGATATTCAACTCACGGGCCTCTGGGGAGT 871396
Query 106251 CAAATGCGTAG-CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 106309
| |||| | || ||||||| | || || || | |||||| ||||| | | ||| |
Sbjct 871395 CGAATG-GCAGACGGCACAGGAAGAAAGTGTCGGCCAAACCTTGCACACCGAGAGCAACA 871337
Query 106310 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAAT 106368
||||||| || ||| ||||| || || ||| ||| || || | || | ||||||
Sbjct 871336 GGTCTGTTTCTCATGTTAGAACGGCGAGCC-TCTGGAACTGGGTAGTAGTTCCGGTCAAT 871278
Query 106369 GACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA 106428
||| | ||| | || |||| || ||| |||| | || | || ||| | | |
Sbjct 871277 GACACAGTTCAAGTTACGAGTAAGAACCTTGATGATCTGGTGCAACTTCTCAAAGTTGTA 871218
Query 106429 AGTGCGAG------------TCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAA 106476
|| | || | || | | |||| | ||| | | || || |||||
Sbjct 871217 AGAGGAAGATTTGTTGGCGTTGTCCTGCTCGACAAAGGCTGGCAAGCAGACGGAAGCCAA 871158
Query 106477 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGA 106536
|| || || || || || | | |||||| | || || |||||||||||
Sbjct 871157 GTTACAGACGGCAACTTCCTCTGGAGAGGAGTACTCAACAACCTCACAGCACAAGTTGGA 871098
Query 106537 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAG 106596
| ||| || || |||| |||| ||||| ||| |||||| || ||||||||||
Sbjct 871097 AGACTTGATGGTACCCAGGTTCTGCTGGTTGGACTTGCGGTTGCAAGCGTCCTTGTAGAC 871038
Query 106597 CATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGG 106655
|||| | || || || ||||| ||||| | || | || | ||||| | || | |
Sbjct 871037 CATGAATGGAGTACCAGTCTCGGTCTGGGCCTCCAAGATGTGGTACCACAGCTTCTGGGC 870978
Query 106656 CTGGTACAATGG--CGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAA 106712
|| | |||| ||| || |||||||| |||||| | |||||| ||| |
Sbjct 870977 CTTG----ATGGTACGTCTTCCACGTCCCTCGCGCTCGTATCTCTCGTAGAGACGTTCGA 870922
Query 106713 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCA-- 106770
|||| || || | ||||| |||||||| |||| |||| |||| |||| |||
Sbjct 870921 ACTCGTCTCCGTAGACATCGGAAAGACCTGGGGCCTCCGATGGAGAGAAGAGAGTCCACG 870862
Query 106771 TTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAG 106830
| || | ||| || ||||||||||| ||||| ||||||||||||| || || |
Sbjct 870861 TGGAGTTGGC--CTCGACACGCTTCATGAAGAGGTCAGGAATCCACAGGGCTGGGAACAA 870804
Query 106831 ATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGA 106889
|| | ||| || | || || | ||| ||||| || | || || || | ||
Sbjct 870803 GTCACGGGCACGGATC-TCCTCCTTACCGTGGTTTTTACGGATGTCGGTGAGGTCGAAGA 870745
Query 106890 TATCCGCGTGCCATGGCTCAAGATAGACTGCGAT------AGATCCCTTTCGACGCCCAG 106943
| || |||||||||||||| || |||| ||||| || || ||| || ||
Sbjct 870744 TGTCAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTAC---CAC 870688
Query 106944 CTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTG 107003
|||| | || || || || ||| ||| || || || | ||||||||| ||||| | |
Sbjct 870687 CTTGGTCCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGG 870628
Query 107004 ATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCC 107063
| ||| || || || ||| ||| | |||| | | | |||||||||| |
Sbjct 870627 AAGTACCGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAAC 870568
Query 107064 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 107123
| || || || || ||| ||||| | ||||||| | | | ||| | |||||||| |
Sbjct 870567 CGATTCCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTT 870508
Query 107124 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 107183
||| ||||||||||| |||| | | ||||||| ||||| || || | ||| ||||
Sbjct 870507 CGATGGAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAGTAC 870448
Query 107184 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATG 107243
| || ||||| || ||||| | ||||| |||| || | ||||| || ||| |
Sbjct 870447 CGGCGTTGAACAGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTAAG 870388
Query 107244 TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303
|||| | ||| ||||||| ||| ||||| || ||||| || | ||| | |||||
Sbjct 870387 TCTCGAGGACTTTTTCAATGTTGTCCGAGTGGACACCAATGGCAACTCTCATGATCATGT 870328
Query 107304 ATTGGGGT 107311
|| |||
Sbjct 870327 GCTGAGGT 870320
Score = 102 bits (112), Expect = 1e-16
Identities = 125/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 106477 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGA 106536
|||||| || || ||||||| || || ||| || | |||||| ||||| |||||
Sbjct 1668368 ATTGCACACTGCAATCTCATCTTTCGATGAGTATTCGACAATTTCACAACACAGATTGGA 1668427
Query 106537 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAG 106596
|||||| || ||||| ||||||||||| || |||||| ||||||||||| ||
Sbjct 1668428 CGACTTAATGGTTCCCAAGTTCTTTTGGTTCGATTTCCGGTTGCATGCATCCTTGTAAAG 1668487
Query 106597 CATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACAC 106647
|||| | || || || ||||| ||||| || | ||||| || ||||||
Sbjct 1668488 CATGAATGGAGTACCTGTCTCTGTCTGCGAGTATAGAATCTTCTCCCACAC 1668538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980689378600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |