Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq4 188 2e-42
seq3 161 2e-34
>seq4
Length=1514682
Score = 188 bits (208), Expect = 2e-42
Identities = 175/222 (79%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| ||||| | || | ||| || |||||||| || ||||| ||||| || | ||||||
Sbjct 1333650 TCTCAGTCTAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGT 1333591
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || || |||||||||||||| ||||||||||||| || |||||||||||||| ||
Sbjct 1333590 TCTGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAGGAATTCC 1333531
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| || || || ||||||||||| ||||||||||| ||| ||||| || ||
Sbjct 1333530 CTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAG 1333471
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| || |||| || || ||||| | |||||
Sbjct 1333470 GGTGATGGTCTTACCGGTCAGGGTCTTGACGAAAATCTGCAT 1333429
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||| | ||| | ||| |||||||| ||||| ||||| ||||| || | ||| ||
Sbjct 88917 TCTCAATCTGAGAACCAAGTGGAGAGTGGATTCTTTCTGAATGTTGTAGTCAGAAAGGGT 88976
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||| || | ||||||||| || |||||||| ||||| |||||||| || || ||
Sbjct 88977 CCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGGATACC 89036
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || ||||| || || |||||||| || ||||||||||||||| ||| || || ||
Sbjct 89037 TTCCTTATCTTGGATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGATTCGACCTCGAG 89096
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || || | ||| || ||||| | |||||
Sbjct 89097 CGTGATAGTCTTACCAGTAAGAGTCTTGACGAAGATCTGCAT 89138
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||||||||| | || | ||| || |||||||| || || || ||||| || | ||| ||
Sbjct 89145 TCTGAGTCTAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAAAGGGT 89204
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | ||||||||| || |||||||||| || |||||||| ||||||||
Sbjct 89205 TCTGCCGTCTTCCAACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGAATGCC 89264
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| || || || || || ||||||||||| || || ||||| || |||||||||||
Sbjct 89265 CTCCTTATCCTGGATCTTCTGCTTGACGTTATCGATAGTGTCGGAGGACTCCACTTCAAG 89324
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || ||||| || || ||||| | |||||
Sbjct 89325 AGTGATTGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 89366
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||| | ||| | ||| || || ||||| ||||| || |||||||||| ||| ||
Sbjct 89373 TCTCAATCTGAGAACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGT 89432
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || | ||||||||| || |||||||| ||||| |||||||| || || ||
Sbjct 89433 TCTGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGGATACC 89492
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || || || || |||||||||||||| ||||||||||| || || || || ||
Sbjct 89493 TTCCTTATCCTGGATCTTTTGCTTGACGTTGTCAATGGTGTCTGAGGACTCAACCTCGAG 89552
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| ||||| | || || ||||| | |||||
Sbjct 89553 TGTGATGGTCTTACCTGTGAGGGTCTTGACGAAGATCTGCAT 89594
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| ||||| | || | ||| || || || || || || || ||||| || | ||| ||
Sbjct 88689 TCTAAGTCTAAGGACCAAGTGGAGTGTAGATTCCTTCTGGATGTTGTAGTCTGAAAGGGT 88748
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| ||||| || | ||||||||| ||||||||||| ||||| |||||||| || || ||
Sbjct 88749 TCTGCCATCCTCCAACTGCTTACCGGCGAAGATAAGACGTTGCTGGTCTGGTGGGATACC 88808
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || || || || || ||||||||||| || |||||||| || |||||||||||
Sbjct 88809 TTCCTTATCCTGGATCTTCTGCTTGACGTTATCGATGGTGTCGGAGGACTCCACTTCAAG 88868
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || ||||| || || ||||| | |||||
Sbjct 88869 AGTGATTGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 88910
>seq3
Length=1705961
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| ||||||| ||| | ||| ||||| ||||| || || || ||||| || | ||| ||
Sbjct 1462851 TCTCAGTCTCAGAACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 1462792
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || || || | ||||||||| ||||||||||||| || ||||| || || || ||
Sbjct 1462791 ACGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCAGGTGGGATTCC 1462732
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|| ||||| || || || ||||||||||| ||||||||||| ||| || || || ||
Sbjct 1462731 CTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCGAG 1462672
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||||||| || | ||||| ||||| | |||||
Sbjct 1462671 GGTGATCGTCTTTCCGGTAAGGGTTTTAACGAAAATCTGCAT 1462630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481386771505
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |