Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq4 127 2e-24
>seq4
Length=1514682
Score = 127 bits (140), Expect = 2e-24
Identities = 444/692 (64%), Gaps = 17/692 (2%)
Strand=Plus/Plus
Query 29710 AAATCCTCTGCCTTAAAGTCGTCCAGGTTCTCCACCCTCCTGTTTATCCTCAGTGTGGGA 29769
|| ||||| ||||||||| || | || ||| ||||||| ||| ||| | ||
Sbjct 615906 AAGTCCTCAAACTTAAAGTCATCTATGTCAGTGACCTTCCTGTTGATCTTCAACTTCGGG 615965
Query 29770 AAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACG 29829
|| | || || | || | | ||| ||| || | || || ||||| ||||| |
Sbjct 615966 AAAGCCCTTGGAACTCTTTGAATCTGCTGCTTGAGAGCATCGACATGATCGCAGTAGATG 616025
Query 29830 TGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATC 29889
|||| |||||||| | ||| | ||||| || || || | || ||| || |||
Sbjct 616026 TGAGAGTCTCCCATGACGTGAATGAACTCACCAGGGTCCATATCGACGACCATGGCTATC 616085
Query 29890 ATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCC 29949
|| || ||||| |||| ||| ||||||||| || || || ||||||||||| || |
Sbjct 616086 ATATAGGTGAGCAGAGCGTACGAGGCGATGTTGAACGGAACGCCGAGCCCCATATCACAG 616145
Query 29950 GACCTCTGGTAGAGCTGACACGAGAGCTCT------CCGTC---------GCTCACGTAA 29994
|| | |||||| | |||||| || |||| | || || || |||||
Sbjct 616146 GATCGCTGGTACATCTGACAGGACAGCTTTGGACGGCCTTCTTTAGGGAAACTGACGTAG 616205
Query 29995 AACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAG 30054
||||| || | | ||||| || || |||||||| || | || |||||
Sbjct 616206 AACTGGCAGAAGACATGGCAAGGTGGCAGAGCCATCTCTTTGAAAGCGGGCGGATTCCAA 616265
Query 30055 GCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGC 30114
|| | | | ||| || | ||| | ||||||| || ||| | | | |||
Sbjct 616266 GCAGAGAGAAGGATCCGGCGGTCGTATGGGTTGGTCTTGAGTGTATGGATGATGTTAGCA 616325
Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCA-TGTCCGTGTACTCTGCTCCGAA 30173
| |||||| ||| | || | ||| || | ||| || ||| || || |||||
Sbjct 616326 ATCTGATCATAGCCCTTGCCAGTGTAATC-GGTGTCACAATCGACGTATTCGGCGCCGAA 616384
Query 30174 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30233
||| | ||| |||||||| || || || |||| || || || |||| || ||
Sbjct 616385 ATGACGCCATTGGAACCCATAAACGGGACCCAAATCGCCTTCGCGTCTGTCGGTGAGTCC 616444
Query 30234 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 30293
| ||||||| | ||||| ||||| ||| |||||||||| | || |||| ||||
Sbjct 616445 CAAAGAGTCCAAATACTCTCTAGAACCATTGCCGTCCCAGATATGAACGCCCTGTTCGGC 616504
Query 30294 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 30353
|||| || || ||| | || || ||||||||||| || | || || ||||
Sbjct 616505 CAGCTTGTTACCGTCAGTGCAACCAGACACAAACCACAGCAGTTCTTTCAAGATTCCCTT 616564
Query 30354 CCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30385
|||| ||||| || |||||||| | ||||
Sbjct 616565 GAAAAACACCCTTTTCGTCGTGAGTAACGGAA 616596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617525299595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |