Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016- 12-06] 15 sequences; 9,213,885 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq4 127 2e-24 >seq4 Length=1514682 Score = 127 bits (140), Expect = 2e-24 Identities = 444/692 (64%), Gaps = 17/692 (2%) Strand=Plus/Plus Query 29710 AAATCCTCTGCCTTAAAGTCGTCCAGGTTCTCCACCCTCCTGTTTATCCTCAGTGTGGGA 29769 || ||||| ||||||||| || | || ||| ||||||| ||| ||| | || Sbjct 615906 AAGTCCTCAAACTTAAAGTCATCTATGTCAGTGACCTTCCTGTTGATCTTCAACTTCGGG 615965 Query 29770 AAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACG 29829 || | || || | || | | ||| ||| || | || || ||||| ||||| | Sbjct 615966 AAAGCCCTTGGAACTCTTTGAATCTGCTGCTTGAGAGCATCGACATGATCGCAGTAGATG 616025 Query 29830 TGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATC 29889 |||| |||||||| | ||| | ||||| || || || | || ||| || ||| Sbjct 616026 TGAGAGTCTCCCATGACGTGAATGAACTCACCAGGGTCCATATCGACGACCATGGCTATC 616085 Query 29890 ATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCC 29949 || || ||||| |||| ||| ||||||||| || || || ||||||||||| || | Sbjct 616086 ATATAGGTGAGCAGAGCGTACGAGGCGATGTTGAACGGAACGCCGAGCCCCATATCACAG 616145 Query 29950 GACCTCTGGTAGAGCTGACACGAGAGCTCT------CCGTC---------GCTCACGTAA 29994 || | |||||| | |||||| || |||| | || || || ||||| Sbjct 616146 GATCGCTGGTACATCTGACAGGACAGCTTTGGACGGCCTTCTTTAGGGAAACTGACGTAG 616205 Query 29995 AACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAG 30054 ||||| || | | ||||| || || |||||||| || | || ||||| Sbjct 616206 AACTGGCAGAAGACATGGCAAGGTGGCAGAGCCATCTCTTTGAAAGCGGGCGGATTCCAA 616265 Query 30055 GCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGC 30114 || | | | ||| || | ||| | ||||||| || ||| | | | ||| Sbjct 616266 GCAGAGAGAAGGATCCGGCGGTCGTATGGGTTGGTCTTGAGTGTATGGATGATGTTAGCA 616325 Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCA-TGTCCGTGTACTCTGCTCCGAA 30173 | |||||| ||| | || | ||| || | ||| || ||| || || ||||| Sbjct 616326 ATCTGATCATAGCCCTTGCCAGTGTAATC-GGTGTCACAATCGACGTATTCGGCGCCGAA 616384 Query 30174 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30233 ||| | ||| |||||||| || || || |||| || || || |||| || || Sbjct 616385 ATGACGCCATTGGAACCCATAAACGGGACCCAAATCGCCTTCGCGTCTGTCGGTGAGTCC 616444 Query 30234 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 30293 | ||||||| | ||||| ||||| ||| |||||||||| | || |||| |||| Sbjct 616445 CAAAGAGTCCAAATACTCTCTAGAACCATTGCCGTCCCAGATATGAACGCCCTGTTCGGC 616504 Query 30294 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 30353 |||| || || ||| | || || ||||||||||| || | || || |||| Sbjct 616505 CAGCTTGTTACCGTCAGTGCAACCAGACACAAACCACAGCAGTTCTTTCAAGATTCCCTT 616564 Query 30354 CCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30385 |||| ||||| || |||||||| | |||| Sbjct 616565 GAAAAACACCCTTTTCGTCGTGAGTAACGGAA 616596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617525299595