Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq4 104 2e-17
seq3 93.3 3e-14
>seq4
Length=1514682
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616
|||||| || || ||| ||| || || || ||||| || || || ||| |||| ||
Sbjct 89157 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGAAAGGGTTCTGCCGTCTTC 89216
Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676
|||||||||||| ||||| || |||| ||| || || | |||| ||||||||| ||
Sbjct 89217 CAACTGCTTACCAGCAAAGATAAGTCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCCTG 89276
Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736
||||| || || || | | | || || || | |||||| || | || || || ||
Sbjct 89277 GATCTTCTGCTTGACGTTATCGATAGTGTCGGAGGACTCCACTTCAAGAGTGATTGTCTT 89336
Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| || || || || ||||||||
Sbjct 89337 ACCAGTCAAGGTCTTGACGAAGATCTGCAT 89366
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || || ||| ||| || ||||| ||||| ||||| ||| ||| |||| ||
Sbjct 1333637 ACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTGCCGTCCTCG 1333578
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||||||||| || || |||| ||| || || | |||| |||||||||||
Sbjct 1333577 AGCTGCTTACCGGCGAAGATAAGTCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGG 1333518
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || || || | | | || || | ||||||||| | || || || ||
Sbjct 1333517 ATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTA 1333458
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||| || || || |||||||||||
Sbjct 1333457 CCGGTCAGGGTCTTGACGAAAATCTGCAT 1333429
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || || ||| ||||| ||||| ||||| ||||| || | || | || |||
Sbjct 88930 ACCAAGTGGAGAGTGGATTCTTTCTGAATGTTGTAGTCAGAAAGGGTCCGGCCATCCTCC 88989
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
||||||||||||||||| || || || || || || | || | || ||||| ||
Sbjct 88990 AACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCTTGG 89049
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || || ||| | | | || || | || ||||| | ||| || || ||
Sbjct 89050 ATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGATTCGACCTCGAGCGTGATAGTCTTA 89109
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || | ||| || || || ||||||||
Sbjct 89110 CCAGTAAGAGTCTTGACGAAGATCTGCAT 89138
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
||||| || ||||| ||| ||||| || |||||||| || || ||| | || |||
Sbjct 89386 ACCAAGTGGAGCGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTTCTGCCATCCTCC 89445
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
||||||||||||||||| || || || || || || | || | || ||||| ||
Sbjct 89446 AACTGCTTACCGGCAAAGATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCCTGG 89505
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
|||||||| || || | | | ||||| | ||| ||||| | || || || ||
Sbjct 89506 ATCTTTTGCTTGACGTTGTCAATGGTGTCTGAGGACTCAACCTCGAGTGTGATGGTCTTA 89565
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || | || || || || ||||||||
Sbjct 89566 CCTGTGAGGGTCTTGACGAAGATCTGCAT 89594
>seq3
Length=1705961
Score = 93.3 bits (102), Expect = 3e-14
Identities = 161/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| || || || | || ||||| || || || ||| || || || ||||| || ||
Sbjct 1462856 CCACCTCTCAGTCTCAGAACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1462797
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | || |||| |||||||||||||| || || || |||| ||| || || | ||
Sbjct 1462796 AGGGTACGGCCGTCCTCCAACTGCTTACCAGCGAAGATAAGTCTCTGCTGGTCAGGTGGG 1462737
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| ||||||||||| ||||| || || || | | | || || | ||| |||
Sbjct 1462736 ATTCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCAACC 1462677
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTGTGT 48773
|| | || ||||| ||||| || | ||||| || |||||||||||| || ||
Sbjct 1462676 TCGAGGGTGATCGTCTTTCCGGTAAGGGTTTTAACGAAAATCTGCATCTTGAGT 1462623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937530359845
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |