Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq1 275 1e-68
seq4 187 5e-42
>seq1
Length=2842153
Score = 275 bits (304), Expect = 1e-68
Identities = 1201/1869 (64%), Gaps = 86/1869 (5%)
Strand=Plus/Minus
Query 212572 CAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGT 212631
|||| ||||||| ||| || || |||||||| || ||||| |||||||| ||| || |
Sbjct 872073 CAGCGGCAGCCTGGGTACGCAGGTAGTACATACCAGTCTTAAGGCCCTTCTTCCAACCAT 872014
Query 212632 GCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGAT 212691
| |||||| | |||| |||| | | | ||| | | || || |
Sbjct 872013 AGAAGTGCATCGAGGTGA---TCTTACCCATGGT----TGGAGA----CTTG----AGGT 871969
Query 212692 GTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGA 212751
| | ||||| |||| |||||| | | | | | ||||| ||||||||||| ||||
Sbjct 871968 GGATGTTCATCGACTCGGACTGGTCAACGTAGGCACCTCTGTCGGCGGCCATGTCGATGA 871909
Query 212752 TATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGC 212811
| | | ||||||| |||||||||||||||| |||| | ||||| || ||||| | |
Sbjct 871908 TTCCCTTTTGGGAGATCTCCCACACGGTCTTGTAGATCTTCTTGAGTTCGTCTGGAACGT 871849
Query 212812 CGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCG--CATGTCCTCGTT 212869
|| | || ||| | || || | | || | | || || ||| | ||||
Sbjct 871848 TAGGAAGGTGCTGGATCGAACCGTTATCACTGATGA--TGTAGTTCTTCATAGCATCGTC 871791
Query 212870 CCAGAGGCCCCTGGTCTCC--AGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCA 212927
||||| || |||| | || ||| || || || ||||||||| |||||||| |||
Sbjct 871790 CCAGATTCCAA-GGTCGACCAAGTCACG-GAGCATGTAAGGGTTGACGATCTGGAACTCA 871733
Query 212928 CCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTC 212987
|| | |||||| || | | ||| | ||| |||||||| ||||||| || ||||||||
Sbjct 871732 CCGGCGAGCACTCTACGCGAGTAGATGTTGGAAGTGTATGGCTCGAAGCACTCGTTGTAA 871673
Query 212988 CCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACT 213047
|||| ||||| | ||| || || ||||| |||||||||| ||| ||| || | |
Sbjct 871672 CCCATGATCTGGGAGGTGGAAGCAGTTGGCATTGGAGCCACCAAGAGCGAGTTTCTAAGT 871613
Query 213048 CCGTGCTCGCCGATG--AGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCT 213105
||| || | |||| || | | | ||| |||||||||| |||| ||| |
Sbjct 871612 CCGGTCTTGGCGATCTTAGCCTTCAA--CTCATCCCAGTCCCA-----CAGATCGGT--T 871562
Query 213106 CGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGT 213165
| |||| | ||||| || |||||||||| || ||| | || ||||| ||
Sbjct 871561 GG--CTTCTTGCCCCACAGATCGTACTGCAAGATACCCTTGGAGGCTGGCGAGCCCTCGT 871504
Query 213166 AAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGT 213225
| | ||| || | ||| |||||| |||| | || |||| || || |||| ||
Sbjct 871503 AGGTCTCGTACACACCTTCCTCGGTGGCCAACTCGGACGAAGCCTCCAAAGCTGCGTGGT 871444
Query 213226 AGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCA 213285
||||||| || || |||| | || | || |||||||||||| ||| || ||
Sbjct 871443 AGATGGTCTCGAAGATCTGGATATTCAACTCACGGGCCTCTGGGGAGTCGAATGG---CA 871387
Query 213286 TCATGCGTTGGAACACA---TCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTC 213342
|| |||| | | || |||| || || || |||| | | ||||||| ||
Sbjct 871386 GACGGCACAGGAAGAAAGTGTCGGCCAAACCTTGCACACCGAGAGCAACAGGTCTGTTTC 871327
Query 213343 TCAGGTTAG-ACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTG 213401
||| ||||| || |||| ||| | ||||| |||| | ||| |||| |||
Sbjct 871326 TCATGTTAGAACGGCGAGC-CTCTGGAACTGGGTAGTAGTTCCGGTCAATGACACAGTTC 871268
Query 213402 AGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTG-AACA------- 213453
| ||| || || || ||| ||| ||| || | ||| ||| || |
Sbjct 871267 AAGTTACGAGTAAGAACCTTGATGATCTGGTGCAACTTCTCAAAGTTGTAAGAGGAAGAT 871208
Query 213454 -CGTAGCCCCCGTCCTGC---ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACG 213509
|| | | ||||||| ||||| | |||| | || | |||| ||| || |||
Sbjct 871207 TTGTTGGCGTTGTCCTGCTCGACAAAGGCTGGCAAGCAGACGGAAGCCAAGTTACAGACG 871148
Query 213510 GCCACCTCCT---GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGG 213566
|| || |||| ||||| | |||||| | | ||| ||||| |||| | |
Sbjct 871147 GCAACTTCCTCTGGAGAG---GAGTACTCAACAACCTCACAGCACAAGTTGGAAGACTTG 871091
Query 213567 ATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAG 213626
||||| ||||||||||| ||||| ||||| |||| || |||||||||| |||| |
Sbjct 871090 ATGGTACCCAGGTTCTGCTGGTTGGACTTGCGGTTGCAAGCGTCCTTGTAGACCATGAAT 871031
Query 213627 GGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACC 213686
|| | || ||||| ||||| | ||| || ||| ||| || | | ||||||||
Sbjct 871030 GGAGTACCAGTCTCGGTCTGGGCCTCCAAGATGTGGTACCACAGCTTCTGGGCCTTGATG 870971
Query 213687 ACCCGCCTGACA-GCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTT-GAATTCGT 213744
|| || || | || ||| |||||| |||||||| |||| ||| ||||
Sbjct 870970 GTACGTCTTCCACGTCCCTCGCG----CTCGTATCTCTCGTAGAG-ACGTTCGAACTCGT 870916
Query 213745 GGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCG--GGACACATGAGGCTCCA-GTCCC 213801
|| |||| | || || || | | || ||| | | ||| |||| ||
Sbjct 870915 CTCCGTAGACATCGGAAAGACCTGG--GGCCTCCGATGGAGAGAAGAGAGTCCACGTGGA 870858
Query 213802 CGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCC 213861
| ||| ||| | || |||||| ||||| || | |||||| || | ||||| ||| |
Sbjct 870857 GTTGGCCTC-GACACGCTTCATGAAGAGGTCAGGAATCCACAGGGCTGGGAACAAGTCAC 870799
Query 213862 TGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCG 213921
|| | |||| ||| || |||||| || | || | ||| |||||||| |
Sbjct 870798 GGGCACGGATCTCCTCCTTACCGTGGTTTTTACGGATGTCGGTGAGGTCGAAGATGTCAG 870739
Query 213922 CGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCA 213978
||||||| ||||| | ||||||||| | ||| || || |||||| || || |||||||
Sbjct 870738 CGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTACCACCTTGGTCCA 870679
Query 213979 CCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGT 214038
| | |||| ||||||||| || | | || | | |||||||| ||||
Sbjct 870678 CGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGGAAGTACCGT 870619
Query 214039 TGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCAC 214098
|||| || || || || ||||| | ||| | | |||| ||| | || || ||||
Sbjct 870618 TGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTGTGGATGTGCAAACCGATTCCAC 870559
Query 214099 CGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGT 214158
||||| ||||||||| | || || || ||| ||| || ||| || | ||| ||
Sbjct 870558 CGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTTCGATGGAGT 870499
Query 214159 CATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTG-GGGCCTGGACGAGCCAGAGTTG 214217
| || | | | | ||||||||| ||| | || || | |||| | || | ||||
Sbjct 870498 CCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGA-GTACCGGCGTTG 870440
Query 214218 AAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGG 214277
|| || || || || || | | | | || | ||| |||| ||||| |||
Sbjct 870439 AACAGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTAAGTCTCGAGG 870380
Query 214278 ACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGC 214337
||| |||| || | ||||| | || ||||| | ||||||||| ||
Sbjct 870379 ACTTTTTCAATGTTGTCCGAGTGGACACCAATGGCAACTCTCATGATCATGTGCTGAGGT 870320
Query 214338 CTCTCTATGGGTCCTTT---GGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAAC 214394
||||| || |||| | | | | || ||||| || |||||||| ||||||||
Sbjct 870319 CTCTC---GGCAACTTTACCGTCGACTCTCAGAAGGTAAGAACGCTCCAGGGTCTTGAAT 870263
Query 214395 CCAAAGTAG 214403
|||||||||
Sbjct 870262 CCAAAGTAG 870254
>seq4
Length=1514682
Score = 187 bits (206), Expect = 5e-42
Identities = 307/443 (69%), Gaps = 0/443 (0%)
Strand=Plus/Plus
Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182
|||| | |||||| ||||| |||||||||| || || | || ||||||| |||||||||
Sbjct 728703 AGAGTAAGCAGGCGAAGTCGGTGTGCAAGCCCTCATCTCTGCAGATGAGCTCGTTGGAGA 728762
Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242
|| |||||| ||||||| || |||| ||||||||||| || | ||||| || || |
Sbjct 728763 AGGTGAGACCTGGCATGAGACCTCTCTTCTTGAGCCAGAAGATCGAAGCGAACGATCCTG 728822
Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302
|||||||||| || || | || ||| | ||| | || | ||| || || |||| ||
Sbjct 728823 AGAAGAAGATACCTTCGATGGCAGCGTAGGCGATCAGACGCTCAGCGTAAAGGGCGTCCT 728882
Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362
||| ||||| | |||||| ||||||| |||||| ||| || |||| |
Sbjct 728883 TGTTCTCCATCCATCTGACGGCCCAGAGGGCCTTCTCCTTGATAGGTGGGATGTTCTCGA 728942
Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTG 48422
||||| || | | ||| ||| | | ||| | | ||||| || |||| |
Sbjct 728943 TGGCCTCAAACAAGTAGTTGGCCTCGCTTTTGTCGGTGATGTAGGTGTCGATCAGCACGG 729002
Query 48423 CGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCT 48482
||| |||| ||||| | ||||| | ||||||||| ||||||||||| | |||||
Sbjct 729003 AGTAAGTCTCGGAGTGGATGTTCTCCACCATGATCTGGAAGCCGTAGAAGGCACGGGCCT 729062
Query 48483 CAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTG 48542
| || ||| || || || | ||| ||| || ||||| | ||| || || || |
Sbjct 729063 CTGGCATCTGAACCTCAGTAGTGAAGTTCTGGCACAAGTTCTCGTCGACGATACCGTCGG 729122
Query 48543 AAGCAGCAAAGAAGGCAAGGACA 48565
|||| || ||||| || || |||
Sbjct 729123 AAGCGGCGAAGAATGCGAGCACA 729145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532625337600
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