Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1 196 9e-45
seq4 178 2e-39
>seq1
Length=2842153
Score = 196 bits (216), Expect = 9e-45
Identities = 568/856 (66%), Gaps = 19/856 (2%)
Strand=Plus/Minus
Query 221781 ACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCA 221840
|||||||||| ||||||| | || || |||||||| ||| |||||||||||||| ||
Sbjct 871095 ACTTGATGGTACCCAGGTTCTGCTGGTTGGACTTGCGGTTGCAAGCGTCCTTGTAGACCA 871036
Query 221841 TAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGC 221900
| || ||| |||||||| ||| ||| ||| || | || ||| || | ||||| |
Sbjct 871035 TGAATGGAGTACCAGTCTCGGTCTGGGCCTCCAAGATGTGGTACCACAGCT-TCTGGGCC 870977
Query 221901 TC-ACCGTCC-TCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAA 221958
| | || | |||| | |||||| || | || | ||| ||| | | || ||
Sbjct 870976 TTGATGGTACGTCTTCCACGT-CCCTCGCGCTCGT-ATCTCTCGTAGAGA-CGT-TCGAA 870921
Query 221959 CTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA-GT 222017
|| || ||||| | ||| || ||||| | | ||| | | ||| |||| ||
Sbjct 870920 CTCGTCTCCGTAGACATCGGAAAGACCTGGGGCCTCCGATGGAGAGAAGAGAGTCCACGT 870861
Query 222018 GCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGAT 222077
| |||| | | ||| | || |||||||||||| || |||||||| || | || | |
Sbjct 870860 GGA-GTTGGCCTCGACACGCTTCATGAAGAGGTCAGGAATCCACAGGGCTGGGAACAAGT 870802
Query 222078 CTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGT 222137
| | || || ||||||| |||| |||||| | | || | || || ||||
Sbjct 870801 CACGGGCACGGATCTCCTCCTTACCGTGGTTTTTACGGATGTCGGTGAGGTCGAAGATGT 870742
Query 222138 CAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGAT 222197
|||||||||| ||||| || |||| ||| | || || |||| |||||| ||||| || |
Sbjct 870741 CAGCGTGCCATGGCTCGAGGTAGATGGCGATGGCACCAGGTCTCTTGTTACCACCTTGGT 870682
Query 222198 CCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGAC 222257
|||| | || |||||||| || | | || | | |||||||| ||
Sbjct 870681 CCACGTAACGGGCCGTGTTGTTGAAGACACGGACCATTGGAATGATACCGTTGGAAGTAC 870622
Query 222258 CGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGA-CATGCCGATA 222316
||||||| || |||||| | || ||| | | ||| ||| | || |||||
Sbjct 870621 CGTTGGTACCGGCAATGTAAGAGCCAGTGGCACGGATGTTG-TGGATGTGCAAACCGATT 870563
Query 222317 CCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATA 222376
||||||||| || ||||| | || || ||| | ||| || ||| || || ||
Sbjct 870562 CCACCGGCGGTCTTGGAGATGAGAGCACACTGCTTCAAAGTATCGTAGATACCTTCGATG 870503
Query 222377 GAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG-ATTTGGTGGAACAGGC 222435
||||||||||| | | | || || ||||||||||| |||| | ||| | | | |||
Sbjct 870502 GAGTCCTCCTTCATGGCAACCAAGAAGCAAGACGACATTTGAGGACGTGGAGTACC-GGC 870444
Query 222436 GTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTC 222495
||| ||||| || || ||||| || ||||| | | ||||| || | ||| |||||
Sbjct 870443 GTTGAACAGAGTTGGCGAAGCGTGCGTGAAGTAACGCTCCGACATGAGGTTGTAAGTCTC 870384
Query 222496 TACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTG 222555
| |||| | | ||||||||| ||| | ||||| ||||||| ||||| |||
Sbjct 870383 GAGGACTTTTTCAATGTTGTCCGAGTGGACACCAATGGCAACTCTCATGATCATGTGCTG 870324
Query 222556 GGGCCTCTCCACAGG---ACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTT 222612
|| ||||| || ||| | | || || ||||| || ||||| |||||
Sbjct 870323 AGGTCTCTCGGCAACTTTACCGTCGACTCTC---AGAAGGTAAGAACGCTCCAGGGTCTT 870267
Query 222613 GAACCCAAAGTAGTTG 222628
||| ||||||||||||
Sbjct 870266 GAATCCAAAGTAGTTG 870251
>seq4
Length=1514682
Score = 178 bits (196), Expect = 2e-39
Identities = 441/654 (67%), Gaps = 24/654 (4%)
Strand=Plus/Minus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
|| || |||||||||||||||||||| | ||| ||||||| |||| ||||| ||
Sbjct 729270 GACATCTGGGAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCACCGAGGAGATCGAC 729211
Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAG---ACGAGCAGCATTT--TC 25588
|| | ||||| || || |||| || | | || | ||||| | || ||
Sbjct 729210 TTGTCTAAGGATCTGATCGACTGGAACACCAAGTTGAACGCCAACGAGAGATACTTCATC 729151
Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648
|| || ||| | |||||||| || || || || ||||| || ||||||| |||||
Sbjct 729150 TCGCGT--GTGCTCGCATTCTTCGCCGCTTCCGACGGTATCGTCGACGAGAACTTGTGCC 729093
Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGT-TTCTACGGTTTCCAGATG 25707
||| ||||| | || || ||| |||||| ||| |||||||| ||||||||
Sbjct 729092 AGAACTTCACTACTGAGGTTCAGATGCCAGAGGCCC-GTGCCTTCTACGGCTTCCAGATC 729034
Query 25708 GCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGAC 25767
| || || | ||||| ||| || || ||| | || ||||| || |||
Sbjct 729033 ATGGTGGAGAACATCCACTCCGAGACTTACTCCGTGCTGATCGACACCTACATCACCGAC 728974
Query 25768 GTCGCCGAGAGAGATCGGCT-GTTTGGTGCCATCGAGCACATACCCAGC-ATCAAGAGGA 25825
|||| | | | || ||||| ||||||||| |||| |||| | |||||| ||
Sbjct 728973 AAAAGCGAG-GCCAACTACTTGTTTGAGGCCATCGAGAACAT-CCCACCTATCAAGGAGA 728916
Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGC-GAGCGGCTG 25884
|||| | |||||| | | ||||| | | | || ||| | || || ||||| |||
Sbjct 728915 AGGCCCTCTGGGCCGTCAGATGGATGGAGAACAAGGACGCC-CTTTACGCTGAGCGTCTG 728857
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
| |||| ||||| | || || ||||| ||| || ||||| || | |||||||||
Sbjct 728856 ATCGCCTACGCTGCCATCGAAGGTATCTTCTTCTCAGGATCGTTCGCTTCGATCTTCTGG 728797
Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004
|||||| ||| || |||||| || || ||| ||||||||||||||| |||| ||
Sbjct 728796 CTCAAGAAGAGAGGTCTCATGCCAGGTCTCACCTTCTCCAACGAGCTCATCTGCAGAGAT 728737
Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064
||||| | |||| || || |||||| | |||| | || ||| ||| |||| ||
Sbjct 728736 GAGGGCTTGCACACCGACTTCGCCTGCTTACTCTTCTCG---CAC---CTCGACAACACT 728683
Query 26065 TC---TCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115
| | || | |||| ||| ||||||| |||||||| || |||||||||
Sbjct 728682 CCAGACCCAGCCATCGTCACCAGAATCATCACCGAGGCTGTCGATATCGAGAAG 728629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844625841600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |