Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq4 82.4 6e-11
>seq4
Length=1514682
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || || || || || | || ||||| ||||| || ||| || | |||
Sbjct 89594 ATGCAGATCTTCGTCAAGACCCTCACAGGTAAGACCATCACACTCGAGGTTGAGTCCTCA 89535
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | |||||||||| ||| || || || || | || ||| ||
Sbjct 89534 GACACCATTGACAACGTCAAGCAAAAGATCCAGGATAAGGAAGGTATCCCACCAGACCAG 89475
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | ||||||||||| || || || ||||| ||| | ||| | ||||||| |||
Sbjct 89474 CAACGTCTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCAGAACCCTTTCCGATTACAAC 89415
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||| || ||||| || ||| |||| | ||||| |||| || ||
Sbjct 89414 ATCCAAAAGGAGTCTACGCTCCACTTGGTTCTCAGATTGAGAGGTGGTAT 89365
Score = 82.4 bits (90), Expect = 6e-11
Identities = 158/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || || || || || | || ||||| ||||| ||| ||| ||| ||||
Sbjct 1333429 ATGCAGATTTTCGTCAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCC 1333488
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | ||||||| || ||| ||||| |||||| | || ||| ||
Sbjct 1333489 GACACCATTGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGAATTCCTCCAGACCAG 1333548
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|||||||||||||| || || || || | || || | |||| | | || || |||
Sbjct 1333549 CAGAGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCAGAACTCTTTCTGACTACAAC 1333608
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
||||| || || || || || ||| |||| | ||| | |||| || || ||
Sbjct 1333609 ATTCAGAAGGAGTCCACCCTCCACTTGGTCCTTAGACTGAGAGGTGGAATCAT 1333661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425404722230685
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |