Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20JCM_2015000_20[genbank_20GCA_5F001950555.1_202016-
12-06] 15 sequences; 9,213,885 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 1e-29
seq4 93.3 3e-13
>seq1
Length=2842153
Score = 147 bits (162), Expect = 1e-29
Identities = 369/554 (67%), Gaps = 10/554 (2%)
Strand=Plus/Minus
Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387
||| || || |||||| | ||||| || ||| ||| || | ||| | ||| | | |
Sbjct 282991 TGCTATCGGAATTGATCTCGGAACCACATACTCTTGCGTTGGTGTCTTCCAACAAGAGAG 282932
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
|| || || |||| ||||||||||| |||||||| || ||||| || || | || ||
Sbjct 282931 GGTTGAGATTGTTGCAAATGACCAAGGAAATAGAACTACGCCATCTTACGTGGCATTCAC 282872
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
||| | || | ||| || || || || || || | || ||||| || ||| ||
Sbjct 282871 TGACAGCGAGCGTCTGATCGGTGAGGCCGCCAAGAACCAGGCTGCCATGAACCCTACCAA 282812
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567
||| | |||||||| || ||| | |||||| | || || ||| | |||||
Sbjct 282811 CACTGTCTTTGATGCCAAGAGACTCATTGGTAGAAAGTTCAGCGATGCTGAAGTCCAGGG 282752
Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATAT--AGAA 474625
|||||| || |||||||| |||||| | | |||||||| || ||| | || ||
Sbjct 282751 CGATATGAAGCACTGGCCTTTCAAGGTGGTCGACGTTGGTGGAAAGCCAAAGATTCAGGT 282692
Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCA--CCGGAACAAATTTCTTCAATGGTTT 474683
| |||| | ||||| || || |||||| || || | || || || ||||||
Sbjct 282691 CGAGTACAAG--GGTGAGACCAA--GGTTTTCACCCCTGAGGAGATCTCGTCTATGGTTC 282636
Query 474684 TAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTA 474742
| |||| ||||| | || || ||| | || || || | | || | ||| || ||
Sbjct 282635 TCTCCAAGATGAAGGAGACTGCTGAG-GCTTACCTCGGTGAGAAGGTCAATGACGCCGTT 282577
Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802
| ||||| ||||| || || || || || || | || || || || || || || |
Sbjct 282576 GTCACTGTCCCAGCTTACTTCAACGACTCCCAGAGACAGGCTACCAAGGACGCCGGTACC 282517
Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862
|| | || | || || | | ||||||||||| || || || || || |||||||
Sbjct 282516 ATCACTGGAATGAACATTATGAGAATTATTAATGAGCCTACCGCTGCTGCCATTGCTTAC 282457
Query 474863 GGTCTTGATAAGAA 474876
|||||||| |||||
Sbjct 282456 GGTCTTGACAAGAA 282443
Score = 132 bits (146), Expect = 3e-25
Identities = 443/680 (65%), Gaps = 12/680 (2%)
Strand=Plus/Minus
Query 475484 AGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACT 475543
||| | || ||||| || || || | || ||| || ||||||| || |||| || ||
Sbjct 282219 AGAAGACTGAGAACCGCCTGCGAGAGAGCCAAGAGAACTCTTTCCTCCTCTACCCAGACC 282160
Query 475544 ACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCT 475603
|| |||| | || || || | ||||| || || | | ||| ||| || || ||
Sbjct 282159 TCTATTGAGATCGACTCCCTCTACGAAGGTATCGACTTCTACACTTCTATCACCAGAGCC 282100
Query 475604 AAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTT 475663
| ||| || || | || |||| ||||| ||| || | | || || || | |||
Sbjct 282099 AGATTCGAGGAGCTCTGCGCTGACCTCTTCAGATCCACTCTCGCTCCAGTCGAGAAGGTT 282040
Query 475664 CTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCA 475723
|||||||| || || | ||||| || || ||| |||| || || || || ||||||||
Sbjct 282039 CTCAGAGACTCCAAGTTGGACAAGTCTCAGGTCGATGAGATCGTCCTCGTTGGAGGTTCT 281980
Query 475724 ACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAAT--GGTAAAAAGTTAA 475781
|| | || || || | |||| | || | | || | | || || || |
Sbjct 281979 ACCCGTATCCCTAAGGTCC-AGAAGCTCGTT-AGCGACTTCTTCTCCGGAAAGGAGCCGA 281922
Query 475782 ATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTAT 475839
| |||| | || |||||||| || || || || || ||||| ||||| || || ||
Sbjct 281921 AC--AAGTCCATCAACCCTGATGAGGCCGTCGCCTACGGTGCTGCCGTCCAGGCTGCCAT 281864
Query 475840 TTTATCAGGTCAATCAGACGAGAA-ACTAAATAATATTGTACTTG-TTGACGTAACTCCA 475897
| | || ||| | | ||||| || | | | || |||| |||| || ||||||
Sbjct 281863 TCTCTCTGGTGACACCTCTGAGAAGACCCAGGACT--TGCTCTTGCTTGATGTCACTCCA 281806
Query 475898 CTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACT 475957
|| || | ||| | || || | ||| || | ||||| || || || ||||| ||
Sbjct 281805 CTCTCTCTCGGTATCGAGACTGCTGGTGGTGTCATGACCAAGCTCATCCCAAGAAACTCT 281746
Query 475958 CCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTA 476017
||||||||||||| || ||| | | || || || || |||| || || || |||
Sbjct 281745 ACTATCCCATGCAAGAAGTCAGAGATCTTCTCTACCTACGCTGACAACCAGCCAGGTGTC 281686
Query 476018 ACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACT 476077
|| || |||| || ||||| |||| || || || || ||| ||||| |
Sbjct 281685 TTGATTCAGGTCTTCGAGGGTGAGAGAACTAGAACCAAGGACAACAACTTGCTTGGTAAG 281626
Query 476078 TTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTT 476137
||| | ||| || || || || || || ||||| |||||||| ||||| || || ||
Sbjct 281625 TTTGAGCTTACTGGAATCCCACCAGCCCCAAGAGGTGTTCCTCAGATTGAGGTCACCTTC 281566
Query 476138 GATATTGATGCAAATGGTAT 476157
|| ||||| || || || ||
Sbjct 281565 GACATTGACGCCAACGGAAT 281546
>seq4
Length=1514682
Score = 93.3 bits (102), Expect = 3e-13
Identities = 126/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| ||||| | || |||||| ||| || | ||||| || ||||| |||||||||||
Sbjct 89416 TTGTAATCGGAAAGGGTTCTGCCATCCTCCAACTGCTTACCGGCAAAGATAAGACGTTGC 89475
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| || || || || |||||||| || || |||||||| ||||| ||||| || ||
Sbjct 89476 TGGTCTGGTGGGATACCTTCCTTATCCTGGATCTTTTGCTTGACGTTGTCAATGGTGTCT 89535
Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | || || || || || ||||| ||||| ||||| ||||| || ||
Sbjct 89536 GAGGACTCAACCTCGAGTGTGATGGTCTTACCTGTGAGGGTCTTGACGAAGATCTG 89591
Score = 91.5 bits (100), Expect = 1e-12
Identities = 128/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| || |||| ||||||||| || || || ||||| || || || ||||| | ||
Sbjct 1333607 TTGTAGTCAGAAAGAGTTCTGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGC 1333548
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| || ||||||||||| |||||||| || ||||| || ||||| ||||| || ||
Sbjct 1333547 TGGTCTGGAGGAATTCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATGGTGTCG 1333488
Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | || ||||| || || |||||||| || ||||| |||||||| ||
Sbjct 1333487 GAAGACTCCA-CCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTGACGAAAATCTG 1333432
Score = 89.7 bits (98), Expect = 3e-12
Identities = 133/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 480581 TTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAA 480640
|||||| || || || |||| || || | | ||| || | ||||| || |||||
Sbjct 88947 TTCTTTCTGAATGTTGTAGTCAGAAAGGGTCCGGCCATCCTCCAACTGCTTACCGGCAAA 89006
Query 480641 AATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGC 480700
||||||||||| || || || || || |||||||| ||||| ||||| || ||||||
Sbjct 89007 GATAAGACGTTGCTGGTCTGGTGGGATACCTTCCTTATCTTGGATCTTCTGCTTGACATT 89066
Query 480701 TTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAAC 480760
||||| || || | | || || || ||||| ||||| || |||||||| ||
Sbjct 89067 GTCAATGGTGTCCGAAGATTCGACCTCGAGCGTGATAGTCTTACCAGTAAGAGTCTTGAC 89126
Query 480761 GAAAATTTG 480769
||| || ||
Sbjct 89127 GAAGATCTG 89135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268178556577220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |